Clean the whole repo (#28)

* Minor fixes to main figures * Fix EF1 * Update jpg EF2 * Fix EF4 * Fix EF3 * Fix figure main titles * Fix EF7 * Add EF5 * Last cleanup, typo fixes, etc. * added ED5 missing figure * fixed a broken link for size analysis * Fixed broken links in ED7 * added more missing stuff --------- Co-authored-by: shaokaiye <shaokaiyeah@gmail.com>
AdaptiveMotorControlLab · Dec 15, 2023 · 4b05a44 · 4b05a44
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diff --git a/data/Extended_Figure3/HRNet_summary_plot.json b/data/Extended_Figure3/HRNet_summary_plot.json
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diff --git a/...ure5/iid/pred_result_img0231_227.png.json → ...ure3/iid/pred_result_img0231_227.png.json b/...ure5/iid/pred_result_img0231_227.png.json → ...ure3/iid/pred_result_img0231_227.png.json
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diff --git a/...re5/iid/pred_result_img05351_698.png.json → ...re3/iid/pred_result_img05351_698.png.json b/...re5/iid/pred_result_img05351_698.png.json → ...re3/iid/pred_result_img05351_698.png.json
diff --git a/...re5/iid/pred_result_img0556_5147.png.json → ...re3/iid/pred_result_img0556_5147.png.json b/...re5/iid/pred_result_img0556_5147.png.json → ...re3/iid/pred_result_img0556_5147.png.json
diff --git a/...ure5/iid/pred_result_img0872_441.png.json → ...ure3/iid/pred_result_img0872_441.png.json b/...ure5/iid/pred_result_img0872_441.png.json → ...ure3/iid/pred_result_img0872_441.png.json
diff --git a/...e5/iid/pred_result_img13674_3696.png.json → ...e3/iid/pred_result_img13674_3696.png.json b/...e5/iid/pred_result_img13674_3696.png.json → ...e3/iid/pred_result_img13674_3696.png.json
diff --git a/...ure5/iid/pred_result_img3823_842.png.json → ...ure3/iid/pred_result_img3823_842.png.json b/...ure5/iid/pred_result_img3823_842.png.json → ...ure3/iid/pred_result_img3823_842.png.json
diff --git a/data/Extended_Figure5/ood/frame_0.png → data/Extended_Figure3/ood/frame_0.png b/data/Extended_Figure5/ood/frame_0.png → data/Extended_Figure3/ood/frame_0.png
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diff --git a/data/Extended_Figure5/ood/image-0049.png → data/Extended_Figure3/ood/image-0049.png b/data/Extended_Figure5/ood/image-0049.png → data/Extended_Figure3/ood/image-0049.png
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diff --git a/..._Figure5/ood/pred_result_frame_0.png.json → ..._Figure3/ood/pred_result_frame_0.png.json b/..._Figure5/ood/pred_result_frame_0.png.json → ..._Figure3/ood/pred_result_frame_0.png.json
diff --git a/...Figure5/ood/pred_result_frame_10.png.json → ...Figure3/ood/pred_result_frame_10.png.json b/...Figure5/ood/pred_result_frame_10.png.json → ...Figure3/ood/pred_result_frame_10.png.json
diff --git a/...gure5/ood/pred_result_image-0049.png.json → ...gure3/ood/pred_result_image-0049.png.json b/...gure5/ood/pred_result_image-0049.png.json → ...gure3/ood/pred_result_image-0049.png.json
diff --git a/...Figure5/ood/pred_result_img007_4.png.json → ...Figure3/ood/pred_result_img007_4.png.json b/...Figure5/ood/pred_result_img007_4.png.json → ...Figure3/ood/pred_result_img007_4.png.json
diff --git a/data/Extended_Figure6/supertopview_test.json → data/Extended_Figure3/supertopview_test.json b/data/Extended_Figure6/supertopview_test.json → data/Extended_Figure3/supertopview_test.json
diff --git a/.../Extended_Figure6/supertopview_train.json → .../Extended_Figure3/supertopview_train.json b/.../Extended_Figure6/supertopview_train.json → .../Extended_Figure3/supertopview_train.json
diff --git a/...penfield_memory_replay_ablation_study.csv → ...penfield_memory_replay_ablation_study.csv b/...penfield_memory_replay_ablation_study.csv → ...penfield_memory_replay_ablation_study.csv
diff --git a/...re7/dlc_openfield_no_masking_zeroshot.csv → ...re4/dlc_openfield_no_masking_zeroshot.csv b/...re7/dlc_openfield_no_masking_zeroshot.csv → ...re4/dlc_openfield_no_masking_zeroshot.csv
diff --git a/data/Extended_Figure2/000000020290.jpg → data/Extended_Figure5/000000020290.jpg b/data/Extended_Figure2/000000020290.jpg → data/Extended_Figure5/000000020290.jpg
diff --git a/data/Extended_Figure2/0231.png → data/Extended_Figure5/0231.png b/data/Extended_Figure2/0231.png → data/Extended_Figure5/0231.png
diff --git a/data/Extended_Figure2/2007_001185.jpg → data/Extended_Figure5/2007_001185.jpg b/data/Extended_Figure2/2007_001185.jpg → data/Extended_Figure5/2007_001185.jpg
diff --git a/data/Extended_Figure2/obs_id_00366.jpg → data/Extended_Figure5/obs_id_00366.jpg b/data/Extended_Figure2/obs_id_00366.jpg → data/Extended_Figure5/obs_id_00366.jpg
diff --git a/data/Extended_Figure5/quadruped_annotations.jpg b/data/Extended_Figure5/quadruped_annotations.jpg
diff --git a/...d_Figure2/rodent_memory_replay_with_sp.h5 → ...d_Figure5/rodent_memory_replay_with_sp.h5 b/...d_Figure2/rodent_memory_replay_with_sp.h5 → ...d_Figure5/rodent_memory_replay_with_sp.h5
diff --git a/...igure2/rodent_memory_replay_without_sp.h5 → ...igure5/rodent_memory_replay_without_sp.h5 b/...igure2/rodent_memory_replay_without_sp.h5 → ...igure5/rodent_memory_replay_without_sp.h5
diff --git a/data/Extended_Figure2/vis_000000020290.jpg → data/Extended_Figure5/vis_000000020290.jpg b/data/Extended_Figure2/vis_000000020290.jpg → data/Extended_Figure5/vis_000000020290.jpg
diff --git a/data/Extended_Figure2/vis_0231.png → data/Extended_Figure5/vis_0231.png b/data/Extended_Figure2/vis_0231.png → data/Extended_Figure5/vis_0231.png
diff --git a/data/Extended_Figure2/vis_2007_001185.jpg → data/Extended_Figure5/vis_2007_001185.jpg b/data/Extended_Figure2/vis_2007_001185.jpg → data/Extended_Figure5/vis_2007_001185.jpg
diff --git a/data/Extended_Figure2/vis_obs_id_00366.jpg → data/Extended_Figure5/vis_obs_id_00366.jpg b/data/Extended_Figure2/vis_obs_id_00366.jpg → data/Extended_Figure5/vis_obs_id_00366.jpg
diff --git a/data/Extended_Figure6/spatial_pyramid_qualitative.jpg b/data/Extended_Figure6/spatial_pyramid_qualitative.jpg
diff --git a/...xtended_Figure8/XBWX0KKOQWMHE6HNY1FL.json → ...xtended_Figure7/XBWX0KKOQWMHE6HNY1FL.json b/...xtended_Figure8/XBWX0KKOQWMHE6HNY1FL.json → ...xtended_Figure7/XBWX0KKOQWMHE6HNY1FL.json
diff --git a/data/Extended_Figure8/frame_1000.jpg → data/Extended_Figure7/frame_1000.jpg b/data/Extended_Figure8/frame_1000.jpg → data/Extended_Figure7/frame_1000.jpg
diff --git a/data/Extended_Figure8/frame_1200.jpg → data/Extended_Figure7/frame_1200.jpg b/data/Extended_Figure8/frame_1200.jpg → data/Extended_Figure7/frame_1200.jpg
diff --git a/data/Extended_Figure8/frame_1300.jpg → data/Extended_Figure7/frame_1300.jpg b/data/Extended_Figure8/frame_1300.jpg → data/Extended_Figure7/frame_1300.jpg
diff --git a/data/Extended_Figure8/frame_1400.jpg → data/Extended_Figure7/frame_1400.jpg b/data/Extended_Figure8/frame_1400.jpg → data/Extended_Figure7/frame_1400.jpg
diff --git a/data/Extended_Figure7/mouse-round-1--submission_pointnet_gt.npy.csv b/data/Extended_Figure7/mouse-round-1--submission_pointnet_gt.npy.csv
@@ -0,0 +1,14 @@
+Task ID,Private Score,Public Score,Metric,No Ensemble Score,Pooled Score,Sequence Level Task,Score Alpha 0.1,Score Alpha 0.5,Score Alpha 1.0,Score Alpha 2.0,Score Alpha 5.0
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diff --git a/data/Extended_Figure7/mouse-round-1--submission_pointnet_modelzoo.npy.csv b/data/Extended_Figure7/mouse-round-1--submission_pointnet_modelzoo.npy.csv
@@ -0,0 +1,14 @@
+Task ID,Private Score,Public Score,Metric,No Ensemble Score,Pooled Score,Sequence Level Task,Score Alpha 0.1,Score Alpha 0.5,Score Alpha 1.0,Score Alpha 2.0,Score Alpha 5.0
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diff --git a/data/Extended_Figure7/permutation_test_keypoint_matching.csv b/data/Extended_Figure7/permutation_test_keypoint_matching.csv
diff --git a/figures/Extended_Figure1.ipynb b/figures/Extended_Figure1.ipynb
diff --git a/figures/Extended_Figure2.ipynb b/figures/Extended_Figure2.ipynb
diff --git a/figures/Extended_Figure3.ipynb b/figures/Extended_Figure3.ipynb
diff --git a/figures/Extended_Figure4.ipynb b/figures/Extended_Figure4.ipynb
diff --git a/figures/Extended_Figure5.ipynb b/figures/Extended_Figure5.ipynb
diff --git a/figures/Extended_Figure6.ipynb b/figures/Extended_Figure6.ipynb
diff --git a/figures/Extended_Figure7.ipynb b/figures/Extended_Figure7.ipynb
diff --git a/figures/Extended_Figure8.ipynb b/figures/Extended_Figure8.ipynb