Batched inference CEBRA & padding at the Solver level
#414
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| name: Build docs | |
| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| branches: | |
| - main | |
| - public | |
| - dev | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Cache dependencies | |
| id: pip-cache | |
| uses: actions/cache@v3 | |
| with: | |
| path: ~/.cache/pip | |
| key: ${{ runner.os }}-pip | |
| - name: Checkout code | |
| uses: actions/checkout@v3 | |
| - name: Checkout cebra figures | |
| uses: actions/checkout@v3 | |
| with: | |
| repository: AdaptiveMotorControlLab/cebra-figures | |
| path: docs/source/cebra-figures | |
| ref: main | |
| - name: Checkout assets | |
| uses: actions/checkout@v3 | |
| with: | |
| repository: AdaptiveMotorControlLab/cebra-assets | |
| path: assets | |
| ref: main | |
| - name: Add assets to repo | |
| run: | | |
| cp -r assets/* . | |
| rm -r assets | |
| - name: Checkout cebra demos | |
| uses: actions/checkout@v3 | |
| with: | |
| repository: AdaptiveMotorControlLab/cebra-demos | |
| path: docs/source/demo_notebooks | |
| ref: main | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install package | |
| run: | | |
| python -m pip install --upgrade pip setuptools wheel | |
| # NOTE(stes) Pandoc version must be at least (2.14.2) but less than (4.0.0). | |
| # as of 29/10/23. Ubuntu 22.04 which is used for ubuntu-latest only has an | |
| # old pandoc version (2.9.). We will hence install the latest version manually. | |
| # previou: sudo apt-get install -y pandoc | |
| wget https://github.com/jgm/pandoc/releases/download/3.1.9/pandoc-3.1.9-1-amd64.deb | |
| sudo dpkg -i pandoc-3.1.9-1-amd64.deb | |
| rm pandoc-3.1.9-1-amd64.deb | |
| pip install torch --extra-index-url https://download.pytorch.org/whl/cpu | |
| pip install '.[docs]' | |
| - name: Build docs | |
| run: | | |
| ls docs/source/cebra-figures | |
| # later also add the -n option to check for broken links | |
| export SPHINXOPTS="-W --keep-going -n" | |
| make docs | |
| # NOTE(stes): To avoid issues as observed in | |
| # https://github.com/AdaptiveMotorControlLab/CEBRA/pull/20, we modified | |
| # this workflow to not rely on PATs. All repos except for the website | |
| # repo are public and only read access is required, so we simply removed | |
| # the tokens from the checkout actions. | |
| # | |
| # For pushing the docs, I temporarily disabled the staging repo, which | |
| # does not add anything informative to the contributor anyways, as it just | |
| # tests whether or not docs can be pushed (the staging branch is not deployed). | |
| # | |
| # The production branch will be built after the PR is merged to main. | |
| # | |
| # Commented code for staging branch: | |
| #- name: Deploy docs (staging) | |
| # uses: cpina/github-action-push-to-another-repository@main | |
| # if: github.ref != 'refs/heads/main' | |
| # env: | |
| # API_TOKEN_GITHUB: ${{ secrets.GH_PAT_WEBSITE }} | |
| # with: | |
| # source-directory: 'docs/page' | |
| # destination-github-username: 'stes' | |
| # destination-repository-name: 'cebra-ai' | |
| # user-name: stes | |
| # user-email: steffen@bethgelab.org | |
| # target-branch: staging | |
| - name: Deploy docs (production) | |
| uses: cpina/github-action-push-to-another-repository@main | |
| if: github.ref == 'refs/heads/main' | |
| env: | |
| API_TOKEN_GITHUB: ${{ secrets.GH_PAT_WEBSITE }} | |
| with: | |
| source-directory: 'docs/page' | |
| destination-github-username: 'stes' | |
| destination-repository-name: 'cebra-ai' | |
| user-name: stes | |
| user-email: steffen@bethgelab.org | |
| target-branch: main |