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Arguments detail
865699871 edited this page Oct 13, 2020
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arguments:
-o <string> output location
-e <string> input expression matrix file, row is gene, column is cell
-c <string> input reference cell type label file
options:
-fr <float> filter arguments, filter gene nodes rate, default=0.3
-h help
arguments:
-o <string> output location
-d <string> position after build model, e.g. ./ref/embedding/02.embeddingDis.xls
-q <string> expression matrix to be tested
options:
-sg <int> select top closest gene number, default=65
-h help
arguments:
-o <string> output location
-d <string> position after build model, e.g. ./ref/embedding/02.embeddingDis.xls
-q <string> expression matrix to be tested
-rd <string> reference expression matrix
-rt <string> reference cell type label
options:
-sg <int> select top closest gene number, default=65
-h help