Arguments detail

build model

arguments:
    -o   <string>   output location
    -e   <string>   input expression matrix file, row is gene, column is cell
    -c   <string>   input reference cell type label file

options:
    -fr   <float>    filter arguments, filter gene nodes rate, default=0.3
    -h   help 

cell type annotation--Bayes

arguments:
    -o   <string>   output location
    -d   <string>   position after build model, e.g. ./ref/embedding/02.embeddingDis.xls
    -q   <string>   expression matrix to be tested

options:
    -sg   <int>     select top closest gene number, default=65
    -h   help 

cell type annotation--SVM

arguments:
    -o   <string>   output location
    -d   <string>   position after build model, e.g. ./ref/embedding/02.embeddingDis.xls
    -q   <string>   expression matrix to be tested
    -rd  <string>   reference expression matrix
    -rt  <string>   reference cell type label

options:
    -sg   <int>     select top closest gene number, default=65
    -h   help