beaglepy is a Python package for calculating phylogenetic likelihoods of sequence evolution. Under the hood, beaglepy utilizes the high performance library BEAGLE and can therefore make use of highly-parallel processors such as those in graphics cards (GPUs) found in many PCs.
beaglepy can be installed on Linux or Mac (potentially on Windows), with the following prerequisites:
- Python 3.7 or newer
- BEAGLE
- pybind11 >= 2.5.0
- A compiler compatible with pybind11 (see requirements)