Python wrappers for CryoEM programs

Installation

pip install emwrap

Or for development:

git clone git@github.com:3dem/emwrap.git
pip install -e emwrap/

Testing

Motioncor3

# Test a batch run:
python -m python -m unittest emwrap.motioncor.tests.TestMotioncor.test_batch

# Test the entire pipeline:
python -m python -m unittest emwrap.motioncor.tests.TestMotioncor.test_pipeline