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Error in stopAndCache(title)

Status: Open.

#205 In zwdzwd/sesame;

· marazzoli opened on Apr 8, 2025

Different beta matrix with openSesame call and more explicit call?

Status: Open.

#204 In zwdzwd/sesame;

· Finterly opened on Apr 2, 2025

KYCG testEnrichmentSEA function appears to give biased z-scores (and p-values) that are stronger for positive estimates than negative ones.

Status: Open.

#203 In zwdzwd/sesame;

· jdreyf opened on Apr 1, 2025

Does QCDPB normalization in EPICv2 process samples individually or jointly when using an sdf list?

Status: Open.

#202 In zwdzwd/sesame;

· fjgalvezcnic opened on Mar 24, 2025

Is there a command to directly connect to the existing ExperimentHub?

Status: Open.

#201 In zwdzwd/sesame;

· mynamezyl opened on Mar 14, 2025

The criteria of the DMR

Status: Open.

#200 In zwdzwd/sesame;

· Moana96 opened on Mar 10, 2025

Is sesameData_getGenesByProbes() existing?

Status: Open.

#199 In zwdzwd/sesame;

· qslin opened on Mar 9, 2025

recommended Prep Code for MSA arrays

Status: Open.

#198 In zwdzwd/sesame;

· claus-h-g opened on Mar 5, 2025

Where to get further annotation of KYCG DBs, e.g. what does metagene "-5" mean?

Status: Open.

#197 In zwdzwd/sesame;

· jdreyf opened on Feb 27, 2025

cnSegmentation() Error - colnames missing

Status: Open.

#195 In zwdzwd/sesame;

· cewim opened on Jan 27, 2025

<code> imputeBetas</code> does not work for example EPICv2 data (sesame 1.24.0)

Status: Open.

#194 In zwdzwd/sesame;

· dwuab opened on Jan 14, 2025

DML models betas using lm() but shouldn't it use glm(family = "binomial") or model M-values?

Status: Open.

#192 In zwdzwd/sesame;

· jdreyf opened on Dec 19, 2024