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mkdocs.yml
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mkdocs.yml
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site_name: BioChatter
theme:
name: material
font:
text: Lato
code: Roboto Mono
palette:
# Palette toggle for dark mode
- media: "(prefers-color-scheme: dark)"
scheme: slate
primary: blue grey
accent: indigo
toggle:
icon: material/brightness-4
name: Switch to light mode
# Palette toggle for light mode
- media: "(prefers-color-scheme: light)"
scheme: default
primary: indigo
accent: blue
toggle:
icon: material/brightness-7
name: Switch to dark mode
features:
- content.code.copy
- content.action.edit
- search.suggest
- search.highlight
- navigation.instant
- navigation.tabs
icon:
repo: fontawesome/brands/github
plugins:
- search
- mkdocstrings:
default_handler: python
- table-reader
- social
site_url: https://biochatter.org/
nav:
- Home: index.md
- Features:
- Basic Usage - Chat: chat.md
- Connecting Knowledge Graphs: kgs.md
- Retrieval-Augmented Generation: rag.md
- Open-source and Local LLMs: open-llm.md
- LLM in your Browser - WebAssembly: wasm.md
- Benchmarking: benchmarking.md
- Podcast my Paper: podcast.md
- Benchmark:
- Overview: benchmark.md
- All Results: benchmark-results.md
- Vignettes:
- Knowledge Graph RAG: vignette-kg.md
- Retrieval-Augmented Generation (RAG): vignette-rag.md
- API Reference:
- LLM Connectivity: llm_connect-reference.md
- Vectorstore: vectorstore-reference.md
- Vectorstore Agent: vectorstore_agent-reference.md
- Prompt Engine: prompts-reference.md
- Podcast: podcast-reference.md
repo_url: https://github.com/biocypher/biochatter
repo_name: biocypher/biochatter
edit_uri: edit/main/docs/
markdown_extensions:
- pymdownx.highlight:
anchor_linenums: true
line_spans: __span
pygments_lang_class: true
- pymdownx.inlinehilite
- pymdownx.snippets
- pymdownx.superfences
- pymdownx.tabbed:
alternate_style: true
slugify: !!python/object/apply:pymdownx.slugs.slugify
kwds:
case: lower
- pymdownx.superfences:
custom_fences:
- name: mermaid
class: mermaid
format: !!python/name:pymdownx.superfences.fence_code_format
- pymdownx.emoji:
emoji_index: !!python/name:material.extensions.emoji.twemoji
emoji_generator: !!python/name:material.extensions.emoji.to_svg
- attr_list
- md_in_html
extra_javascript:
- https://unpkg.com/tablesort@5.3.0/dist/tablesort.min.js
- scripts/tablesort.js
hooks:
- docs/scripts/hooks.py