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cellphonedb.data.prep.rst

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Data Preparation Functions

Load User Files

.. automodule:: cellphonedb.controller
   :members: get_user_files, get_user_file
   :undoc-members:
   :show-inheritance:

Validate meta DataFrame

.. automodule:: cellphonedb.src.core.preprocessors.method_preprocessors
   :members: meta_preprocessor
   :undoc-members:
   :show-inheritance:

Validate counts DataFrame

.. automodule:: cellphonedb.src.core.preprocessors.counts_preprocessors
   :members: counts_preprocessor
   :undoc-members:
   :show-inheritance:

Subsample the counts data

.. automodule:: cellphonedb.src.core.utils.subsampler.Subsampler
   :members: __init__, subsample
   :undoc-members:
   :show-inheritance: