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Wang Lab @ MIT and Broad Institute

50 followers
Cambridge, MA
https://wangxiaolab.org

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README.md

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ClusterMap ClusterMap Public

ClusterMap for multi-scale clustering analysis of spatial gene expression

Jupyter Notebook 45 12
spin spin Public

SPatial INtegration of spatially resolved transcriptomics datasets

Jupyter Notebook 17
CAST CAST Public

CAST package

Python 40 3
starfinder starfinder Public

Customized snakemake workflow for computational image processing

Jupyter Notebook 1
harmonics harmonics Public

Harmonic analysis of spatial transcriptomics data

Python 1

Repositories

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All Jupyter Notebook MATLAB Python

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Showing 10 of 17 repositories

ClusterMap Public
ClusterMap for multi-scale clustering analysis of spatial gene expression

wanglab-broad/ClusterMap’s past year of commit activity

Jupyter Notebook 45 GPL-3.0 12 5 0 Updated Jun 13, 2025
starfinder Public
Customized snakemake workflow for computational image processing

wanglab-broad/starfinder’s past year of commit activity

Jupyter Notebook 1 MIT 0 1 0 Updated Jun 4, 2025
spin Public
SPatial INtegration of spatially resolved transcriptomics datasets

wanglab-broad/spin’s past year of commit activity

Jupyter Notebook 17 GPL-3.0 0 2 0 Updated Mar 14, 2025
drn-analysis Public

wanglab-broad/drn-analysis’s past year of commit activity

Jupyter Notebook 0 MIT 0 0 0 Updated Feb 5, 2025
harmonics Public
Harmonic analysis of spatial transcriptomics data

wanglab-broad/harmonics’s past year of commit activity

Python 1 MIT 0 0 0 Updated Jan 19, 2025
probe-design Public

wanglab-broad/probe-design’s past year of commit activity

Jupyter Notebook 0 MIT 0 0 0 Updated Nov 6, 2024
CAST Public
CAST package

wanglab-broad/CAST’s past year of commit activity

Python 40 MIT 3 0 0 Updated Oct 26, 2024
hepatic_recon Public

wanglab-broad/hepatic_recon’s past year of commit activity

Jupyter Notebook 0 MIT 0 0 0 Updated Sep 30, 2024
starmap-matlab Public

wanglab-broad/starmap-matlab’s past year of commit activity

MATLAB 1 MIT 1 0 0 Updated Aug 27, 2024
Multicap-analysis Public

wanglab-broad/Multicap-analysis’s past year of commit activity

Jupyter Notebook 2 MIT 0 0 0 Updated Jun 24, 2024

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