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base repository: walaj/SeqLib
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base: master
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head repository: walaj/SeqLib
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compare: jhess
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  • 8 commits
  • 11 files changed
  • 2 contributors

Commits on Sep 10, 2019

  1. Merge branch 'master' of github.com:walaj/SeqLib into jh_nov2018

    @julianhess
    julianhess committed Sep 10, 2019
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  2. Remove internal dependency on htslib

    @julianhess
    julianhess committed Sep 10, 2019
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  3. Merge branch 'jh_nov2018' into new_hts

    @julianhess
    julianhess committed Sep 10, 2019
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Commits on Sep 25, 2019

  1. Make Num(Hard|Soft)Clipped more efficient 

    No need to enumerate the whole CIGAR string; we need only to look at the first
and lass CIGAR operators, since clips cannot occur anywhere else in the read.
    @julianhess
    julianhess committed Sep 25, 2019
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Commits on Mar 26, 2021

  1. Merge branch 'master' of github.com:walaj/SeqLib

    @julianhess
    julianhess committed Mar 26, 2021
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  2. Add BamReader::GetRegionIdx

    @julianhess
    julianhess committed Mar 26, 2021
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  3. Remove a couple new htslib build references

    @julianhess
    julianhess committed Mar 26, 2021
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Commits on Mar 27, 2021

  1. updated travis build to install htslib

    Jeremiah Wala committed Mar 27, 2021
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