Simple tool for clustering spatial points with categorical labels.

In Situ Sequencing Segmentation

Analytical neighborhood enrichment test

A napari plugin for Points2Regions

In Situ Sequencing decoding compatible with Google Colab

spage2vec, developmental human heart, in situ sequensing

Our workflow for our paper "“Machine learningfor cell classification and neighborhood analysis in glioma tissue"

🧫 Framework for predicting cellular traction forces with Deep Learning. 🤖

Graph-based Decoding for In Situ Sequencing