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log file :
chrM chr1 chr2 chr3 chr4 chr5 chr6 chr7 chr8 chr9 chr10 chr11 chr12 chr13 chr14 chr15 chr16 chr17 chr18 chr19 chr20 chr21 chr22 chrX chrY Assembling contigs... chrchrM done chrchr1 done chrchr2 done chrchr3 done chrchr4 done chrchr5 done chrchr6 done chrchr7 done chrchr8 done chrchr9 done chrchr10 done chrchr11 done chrchr12 done chrchr13 done chrchr14 done chrchr15 done chrchr16 done chrchr17 done chrchr18 done chrchr19 done chrchr20 done chrchr21 done chrchr22 done chrchrX done chrchrY done Processing 26183 supplementary clusters... Discordant (INV): 2648 Discordant (DUP): 3618 Discordant (INS): 84500 OEA: 31962 Read Count: 2008199 Partition Count: 209992 Total Contigs: 1.77093e+06 Contigs: 0 44462 Average Num Contigs Pre-Filter: 8.43332 Average Num Contigs Post-Filter: 0.211732 Average Contig Support: 2.98799 Rate Parameter Estimate: 0.0756226 ASSEMBLY TIME: 583.9
Filtered 0 contigs. PROBABILISTIC FILTER TIME: 0
Indexing contigs... Number of unique kmers: 941427 Max hits: 0 INDEX TIME: 2.37
Generating intervals... chrchrM done chrchr1 done chrchr2 done *** Error in `/tools/svict/svict': free(): invalid next size (normal): 0x000000002a6c43c0 *** ======= Backtrace: ========= /lib64/libc.so.6(+0x81299)[0x7f829195c299] /tools/svict/svict[0x42bd89] /tools/svict/svict[0x433a18] /tools/svict/svict[0x408b35] /tools/svict/svict[0x4049f3] /lib64/libc.so.6(__libc_start_main+0xf5)[0x7f82918fd555] /tools/svict/svict[0x40505f] ======= Memory map: ======== 00400000-0047c000 r-xp 00000000 00:2b 55864127279 /tools/svict/svict 0067b000-0067c000 r--p 0007b000 00:2b 55864127279 /tools/svict/svict 0067c000-0067d000 rw-p 0007c000 00:2b 55864127279 /tools/svict/svict 0067d000-0067e000 rw-p 00000000 00:00 0 019b6000-89db9000 rw-p 00000000 00:00 0 [heap] 7f822c000000-7f822c021000 rw-p 00000000 00:00 0 7f822c021000-7f8230000000 ---p 00000000 00:00 0 7f82319e3000-7f823eebe000 rw-p 00000000 00:00 0 7f823fabf000-7f82918db000 rw-p 00000000 00:00 0 7f82918db000-7f8291a9f000 r-xp 00000000 fd:00 404043695 /usr/lib64/libc-2.17.so 7f8291a9f000-7f8291c9e000 ---p 001c4000 fd:00 404043695 /usr/lib64/libc-2.17.so 7f8291c9e000-7f8291ca2000 r--p 001c3000 fd:00 404043695 /usr/lib64/libc-2.17.so 7f8291ca2000-7f8291ca4000 rw-p 001c7000 fd:00 404043695 /usr/lib64/libc-2.17.so 7f8291ca4000-7f8291ca9000 rw-p 00000000 00:00 0 7f8291ca9000-7f8291cbe000 r-xp 00000000 fd:00 402653315 /usr/lib64/libgcc_s-4.8.5-20150702.so.1 7f8291cbe000-7f8291ebd000 ---p 00015000 fd:00 402653315 /usr/lib64/libgcc_s-4.8.5-20150702.so.1 7f8291ebd000-7f8291ebe000 r--p 00014000 fd:00 402653315 /usr/lib64/libgcc_s-4.8.5-20150702.so.1 7f8291ebe000-7f8291ebf000 rw-p 00015000 fd:00 402653315 /usr/lib64/libgcc_s-4.8.5-20150702.so.1 7f8291ebf000-7f8291fc0000 r-xp 00000000 fd:00 404043704 /usr/lib64/libm-2.17.so 7f8291fc0000-7f82921bf000 ---p 00101000 fd:00 404043704 /usr/lib64/libm-2.17.so 7f82921bf000-7f82921c0000 r--p 00100000 fd:00 404043704 /usr/lib64/libm-2.17.so 7f82921c0000-7f82921c1000 rw-p 00101000 fd:00 404043704 /usr/lib64/libm-2.17.so 7f82921c1000-7f82921d8000 r-xp 00000000 fd:00 404043708 /usr/lib64/libpthread-2.17.so 7f82921d8000-7f82923d7000 ---p 00017000 fd:00 404043708 /usr/lib64/libpthread-2.17.so 7f82923d7000-7f82923d8000 r--p 00016000 fd:00 404043708 /usr/lib64/libpthread-2.17.so 7f82923d8000-7f82923d9000 rw-p 00017000 fd:00 404043708 /usr/lib64/libpthread-2.17.so 7f82923d9000-7f82923dd000 rw-p 00000000 00:00 0 7f82923dd000-7f82923ff000 r-xp 00000000 fd:00 402706987 /usr/lib64/ld-2.17.so 7f829244c000-7f8292451000 rw-p 00000000 00:00 0 7f8292451000-7f82924f3000 r--p 00000000 fd:00 404043686 /usr/lib64/libstdc++.so.6.0.26 7f82924f3000-7f8292572000 r-xp 000a2000 fd:00 404043686 /usr/lib64/libstdc++.so.6.0.26 7f8292572000-7f82925b3000 r--p 00121000 fd:00 404043686 /usr/lib64/libstdc++.so.6.0.26 7f82925b3000-7f82925be000 r--p 00161000 fd:00 404043686 /usr/lib64/libstdc++.so.6.0.26 7f82925be000-7f82925c2000 rw-p 0016c000 fd:00 404043686 /usr/lib64/libstdc++.so.6.0.26 7f82925c2000-7f82925c6000 rw-p 00000000 00:00 0 7f82925c6000-7f82925c9000 r--p 00000000 fd:00 404256474 /usr/lib64/libz.so.1.2.11 7f82925c9000-7f82925dd000 r-xp 00003000 fd:00 404256474 /usr/lib64/libz.so.1.2.11 7f82925dd000-7f82925e4000 r--p 00017000 fd:00 404256474 /usr/lib64/libz.so.1.2.11 7f82925e4000-7f82925e5000 r--p 0001d000 fd:00 404256474 /usr/lib64/libz.so.1.2.11 7f82925e5000-7f82925e6000 rw-p 0001e000 fd:00 404256474 /usr/lib64/libz.so.1.2.11 7f82925fa000-7f82925fe000 rw-p 00000000 00:00 0 7f82925fe000-7f82925ff000 r--p 00021000 fd:00 402706987 /usr/lib64/ld-2.17.so 7f82925ff000-7f8292600000 rw-p 00022000 fd:00 402706987 /usr/lib64/ld-2.17.so 7f8292600000-7f8292601000 rw-p 00000000 00:00 0 7ffeb6667000-7ffeb6688000 rw-p 00000000 00:00 0 [stack] 7ffeb66de000-7ffeb66e0000 r-xp 00000000 00:00 0 [vdso] ffffffffff600000-ffffffffff601000 r-xp 00000000 00:00 0 [vsyscall]
The text was updated successfully, but these errors were encountered:
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log file :
chrM
chr1
chr2
chr3
chr4
chr5
chr6
chr7
chr8
chr9
chr10
chr11
chr12
chr13
chr14
chr15
chr16
chr17
chr18
chr19
chr20
chr21
chr22
chrX
chrY
Assembling contigs...
chrchrM done
chrchr1 done
chrchr2 done
chrchr3 done
chrchr4 done
chrchr5 done
chrchr6 done
chrchr7 done
chrchr8 done
chrchr9 done
chrchr10 done
chrchr11 done
chrchr12 done
chrchr13 done
chrchr14 done
chrchr15 done
chrchr16 done
chrchr17 done
chrchr18 done
chrchr19 done
chrchr20 done
chrchr21 done
chrchr22 done
chrchrX done
chrchrY done
Processing 26183 supplementary clusters...
Discordant (INV): 2648
Discordant (DUP): 3618
Discordant (INS): 84500
OEA: 31962
Read Count: 2008199
Partition Count: 209992
Total Contigs: 1.77093e+06
Contigs: 0 44462
Average Num Contigs Pre-Filter: 8.43332
Average Num Contigs Post-Filter: 0.211732
Average Contig Support: 2.98799
Rate Parameter Estimate: 0.0756226
ASSEMBLY TIME: 583.9
Filtered 0 contigs.
PROBABILISTIC FILTER TIME: 0
Indexing contigs...
Number of unique kmers: 941427
Max hits: 0
INDEX TIME: 2.37
Generating intervals...
chrchrM done
chrchr1 done
chrchr2 done
*** Error in `/tools/svict/svict': free(): invalid next size (normal): 0x000000002a6c43c0 ***
======= Backtrace: =========
/lib64/libc.so.6(+0x81299)[0x7f829195c299]
/tools/svict/svict[0x42bd89]
/tools/svict/svict[0x433a18]
/tools/svict/svict[0x408b35]
/tools/svict/svict[0x4049f3]
/lib64/libc.so.6(__libc_start_main+0xf5)[0x7f82918fd555]
/tools/svict/svict[0x40505f]
======= Memory map: ========
00400000-0047c000 r-xp 00000000 00:2b 55864127279 /tools/svict/svict
0067b000-0067c000 r--p 0007b000 00:2b 55864127279 /tools/svict/svict
0067c000-0067d000 rw-p 0007c000 00:2b 55864127279 /tools/svict/svict
0067d000-0067e000 rw-p 00000000 00:00 0
019b6000-89db9000 rw-p 00000000 00:00 0 [heap]
7f822c000000-7f822c021000 rw-p 00000000 00:00 0
7f822c021000-7f8230000000 ---p 00000000 00:00 0
7f82319e3000-7f823eebe000 rw-p 00000000 00:00 0
7f823fabf000-7f82918db000 rw-p 00000000 00:00 0
7f82918db000-7f8291a9f000 r-xp 00000000 fd:00 404043695 /usr/lib64/libc-2.17.so
7f8291a9f000-7f8291c9e000 ---p 001c4000 fd:00 404043695 /usr/lib64/libc-2.17.so
7f8291c9e000-7f8291ca2000 r--p 001c3000 fd:00 404043695 /usr/lib64/libc-2.17.so
7f8291ca2000-7f8291ca4000 rw-p 001c7000 fd:00 404043695 /usr/lib64/libc-2.17.so
7f8291ca4000-7f8291ca9000 rw-p 00000000 00:00 0
7f8291ca9000-7f8291cbe000 r-xp 00000000 fd:00 402653315 /usr/lib64/libgcc_s-4.8.5-20150702.so.1
7f8291cbe000-7f8291ebd000 ---p 00015000 fd:00 402653315 /usr/lib64/libgcc_s-4.8.5-20150702.so.1
7f8291ebd000-7f8291ebe000 r--p 00014000 fd:00 402653315 /usr/lib64/libgcc_s-4.8.5-20150702.so.1
7f8291ebe000-7f8291ebf000 rw-p 00015000 fd:00 402653315 /usr/lib64/libgcc_s-4.8.5-20150702.so.1
7f8291ebf000-7f8291fc0000 r-xp 00000000 fd:00 404043704 /usr/lib64/libm-2.17.so
7f8291fc0000-7f82921bf000 ---p 00101000 fd:00 404043704 /usr/lib64/libm-2.17.so
7f82921bf000-7f82921c0000 r--p 00100000 fd:00 404043704 /usr/lib64/libm-2.17.so
7f82921c0000-7f82921c1000 rw-p 00101000 fd:00 404043704 /usr/lib64/libm-2.17.so
7f82921c1000-7f82921d8000 r-xp 00000000 fd:00 404043708 /usr/lib64/libpthread-2.17.so
7f82921d8000-7f82923d7000 ---p 00017000 fd:00 404043708 /usr/lib64/libpthread-2.17.so
7f82923d7000-7f82923d8000 r--p 00016000 fd:00 404043708 /usr/lib64/libpthread-2.17.so
7f82923d8000-7f82923d9000 rw-p 00017000 fd:00 404043708 /usr/lib64/libpthread-2.17.so
7f82923d9000-7f82923dd000 rw-p 00000000 00:00 0
7f82923dd000-7f82923ff000 r-xp 00000000 fd:00 402706987 /usr/lib64/ld-2.17.so
7f829244c000-7f8292451000 rw-p 00000000 00:00 0
7f8292451000-7f82924f3000 r--p 00000000 fd:00 404043686 /usr/lib64/libstdc++.so.6.0.26
7f82924f3000-7f8292572000 r-xp 000a2000 fd:00 404043686 /usr/lib64/libstdc++.so.6.0.26
7f8292572000-7f82925b3000 r--p 00121000 fd:00 404043686 /usr/lib64/libstdc++.so.6.0.26
7f82925b3000-7f82925be000 r--p 00161000 fd:00 404043686 /usr/lib64/libstdc++.so.6.0.26
7f82925be000-7f82925c2000 rw-p 0016c000 fd:00 404043686 /usr/lib64/libstdc++.so.6.0.26
7f82925c2000-7f82925c6000 rw-p 00000000 00:00 0
7f82925c6000-7f82925c9000 r--p 00000000 fd:00 404256474 /usr/lib64/libz.so.1.2.11
7f82925c9000-7f82925dd000 r-xp 00003000 fd:00 404256474 /usr/lib64/libz.so.1.2.11
7f82925dd000-7f82925e4000 r--p 00017000 fd:00 404256474 /usr/lib64/libz.so.1.2.11
7f82925e4000-7f82925e5000 r--p 0001d000 fd:00 404256474 /usr/lib64/libz.so.1.2.11
7f82925e5000-7f82925e6000 rw-p 0001e000 fd:00 404256474 /usr/lib64/libz.so.1.2.11
7f82925fa000-7f82925fe000 rw-p 00000000 00:00 0
7f82925fe000-7f82925ff000 r--p 00021000 fd:00 402706987 /usr/lib64/ld-2.17.so
7f82925ff000-7f8292600000 rw-p 00022000 fd:00 402706987 /usr/lib64/ld-2.17.so
7f8292600000-7f8292601000 rw-p 00000000 00:00 0
7ffeb6667000-7ffeb6688000 rw-p 00000000 00:00 0 [stack]
7ffeb66de000-7ffeb66e0000 r-xp 00000000 00:00 0 [vdso]
ffffffffff600000-ffffffffff601000 r-xp 00000000 00:00 0 [vsyscall]
The text was updated successfully, but these errors were encountered: