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[Core] Optimizing cross-attention QKVParallelLinear computation #12325

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merged 10 commits into from
Mar 6, 2025

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NickLucche
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@NickLucche NickLucche commented Jan 22, 2025

TL;DR: Basically another take at #7448 based on the work on the Whisper model, with sugar on top to provide a drop-in replacement module.

Addressing TODOs https://github.com/vllm-project/vllm/blob/main/vllm/model_executor/models/bart.py#L352 and https://github.com/vllm-project/vllm/blob/main/vllm/model_executor/models/mllama.py#L750.

Current cross-attention QKV projection is sub-optimal as we're wasting cycles on bigger-than-necessary matrices, especially important in the compute-bound stage. That is because QKVParallellLinear layers are being used to only compute the q and kv projection, separately in two sequential calls.

I propose adopting the solution we make use of here https://github.com/vllm-project/vllm/blob/main/vllm/model_executor/models/whisper.py#L173, where q\kv are being split into a ColumnParallelLinear and QKVParallelLinear layer, respectively, instantiating and sharding only the matrices we actually make use of. Support of tensor parallelism should be unscathed.

I also provide a drop-in replacement util layer QKVCrossParallellLinear to use in substitution of QKVParallellLinear layers such that loading code remains the same, especially the usual stacked_params_mapping.

==>Let me know what you think about the util Module interface/API, otherwise I can just substitute in its optimized code inline.

Early benchmarking results (single L4 24gb, running facebook/bart-large-cnn):

PRE-PR b197a5cc

============ Serving Benchmark Result ============
Successful requests:                     12        
Benchmark duration (s):                  3.64      
Total input tokens:                      790       
Total generated tokens:                  374       
Request throughput (req/s):              3.29      
Output token throughput (tok/s):         102.67    
Total Token throughput (tok/s):          319.55    
---------------Time to First Token----------------
Mean TTFT (ms):                          73.88     
Median TTFT (ms):                        69.12     
P99 TTFT (ms):                           129.42    
-----Time per Output Token (excl. 1st token)------
Mean TPOT (ms):                          10.50     
Median TPOT (ms):                        9.94      
P99 TPOT (ms):                           14.84     
---------------Inter-token Latency----------------
Mean ITL (ms):                           8.93      
Median ITL (ms):                         8.70      
P99 ITL (ms):                            10.50     
==================================================

POST-PR

============ Serving Benchmark Result ============
Successful requests:                     12        
Benchmark duration (s):                  3.62      
Total input tokens:                      790       
Total generated tokens:                  374       
Request throughput (req/s):              3.31      
Output token throughput (tok/s):         103.29    
Total Token throughput (tok/s):          321.46    
---------------Time to First Token----------------
Mean TTFT (ms):                          74.35     
Median TTFT (ms):                        69.84     
P99 TTFT (ms):                           129.07    
-----Time per Output Token (excl. 1st token)------
Mean TPOT (ms):                          10.37     
Median TPOT (ms):                        9.81      
P99 TPOT (ms):                           14.53     
---------------Inter-token Latency----------------
Mean ITL (ms):                           8.84      
Median ITL (ms):                         8.75      
P99 ITL (ms):                            9.85      
==================================================

TODO:

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@mgoin mgoin added the ready ONLY add when PR is ready to merge/full CI is needed label Feb 4, 2025
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This looks like a great improvement to me! Cc @afeldman-nm

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Please fix the error in distributed tests.

@NickLucche NickLucche force-pushed the encdec-separate-crossattn branch from 08f284e to 9205c72 Compare February 17, 2025 16:52
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Thanks for the PR! I think this will be a valuable fix for encoder/decoder models. Just had one or two pieces of feedback.

A general observation - the original QKVParallelLinear has pretty limited test-coverage; the only unit-tests I could find were LoRA-oriented tests in tests/lora. So in #7448 I did not bother adding additional unit tests for QCrossKVParallelLinear, and I see that that is also the case in this PR.

That said, I observe that QKVParallelLinear has pretty complicated weight loading logic, with a lot of special cases for different weight representation formats i.e. GGUF, "bitsandbytes_4bit", etc.:

def weight_loader(self,

In fact, there appear to be two different weight loading methods, weight_loader() and weight_loader_v2() (I actually don't know what the difference between these methods is):

def weight_loader_v2(self,

So I am wondering, how many of these different weight-loading scenarios are supported by QKVCrossParallelLinear? All of them, or just a minimal set which covers typical cases? Personally I think it is fine to cover only the most commonly-used configurations in this PR.

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NickLucche commented Feb 19, 2025

Thanks for reviewing!

how many of these different weight-loading scenarios are supported by QKVCrossParallelLinear?

Given I am only re-using the QKVParallel and ColumnParallel pre-instantiated weight loaders, I would expect it to work with any format already covered by the two layers.
The weight_loader v1/v2 creation happens here https://github.com/vllm-project/vllm/blob/main/vllm/model_executor/layers/linear.py#L322 conditioned on the quant_config which I forward to the two layers here https://github.com/vllm-project/vllm/pull/12325/files#diff-b0ba1095e9881e5c87e33dfd20958d1e1ceafe8a4433aa692f468e61be130b21R676.

I did not bother adding additional unit tests for QCrossKVParallelLinear, and I see that that is also the case in this PR.

I've given some thought to this but I couldn't find a way to add meaningful tests, other than writing a "test model loading" function, which is already covered by all other correctness tests. Let me know if I've overlooked something.

@NickLucche NickLucche force-pushed the encdec-separate-crossattn branch from 12d448a to 75ce6ac Compare February 19, 2025 10:04
NickLucche and others added 9 commits March 5, 2025 13:42
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@NickLucche NickLucche force-pushed the encdec-separate-crossattn branch from 75ce6ac to 75b5425 Compare March 5, 2025 13:57
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Rebased again

@DarkLight1337 DarkLight1337 enabled auto-merge (squash) March 5, 2025 14:19
@DarkLight1337 DarkLight1337 merged commit 69ff99f into vllm-project:main Mar 6, 2025
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Comment on lines +1201 to +1203
# Use a dictionary to avoid submodules parameters auto-registration:
# drop-in replacement for a `QKVParallelLinear` module.
self.proj = dict()
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@NickLucche I noticed that this layer broke the quantization support on Mllama (I tested w8a8 and bnb, both are broken with failing loading), because they will create extra weights to store quant_state or weight_scale etc.

KeyError: 'language_model.model.layers.13.cross_attn.qkv_proj.weight_scale'
ValueError: pack_factor not set for parameter language_model.model.layers.3.cross_attn.qkv_proj.weight.

Is it possible to implement this layer without hacking the auto-registration and keep it simple at the same time?

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Sorry about that this didn't show up in any test.
I am afraid the only solution then would be to tear apart the layer and bring the QKV and ColumnParallel separately directly into mllama model code.

Is there any way to avoid creating quant state for empty nn.Parameters instead?

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* [Hardware][TPU]Enable ragged paged attention kernel and resolve recompilation issue (vllm-project#14310)

Signed-off-by: Chengji Yao <chengjiyao@google.com>

* [Doc] Fix a typo (vllm-project#14385)

* [Bugfix] Correctly call `cudaProfilerStop` in benchmarks script (vllm-project#14183)

Signed-off-by: Brayden Zhong <b8zhong@uwaterloo.ca>

* [Perf] Reduce MLA CPU overheads in V1 (vllm-project#14384)

Signed-off-by: Lucas Wilkinson <lwilkinson@neuralmagic.com>
Signed-off-by: Lucas Wilkinson <lwilkins@redhat.com>

* [FP8] Refactor apply_fp8_linear and apply_fp8_linear_generic into an object (vllm-project#14390)

Signed-off-by: luka <luka@neuralmagic.com>

* [BugFix] Illegal Memory Access in the blockwise cutlass fp8 GEMMs (vllm-project#14396)

* [Bugfix] Fix JambaForCausalLM LoRA  (vllm-project#14370)

Signed-off-by: Jee Jee Li <pandaleefree@gmail.com>

* [Build] Add nightly wheel fallback when latest commit wheel unavailable (vllm-project#14358)

Signed-off-by: Isotr0py <2037008807@qq.com>

* OpenVINO: added CPU-like conditions (vllm-project#14338)

Signed-off-by: Ilya Lavrenov <ilya.lavrenov@intel.com>

* [GH] Auto-apply multi-modality label to relevant PRs (vllm-project#14402)

Signed-off-by: DarkLight1337 <tlleungac@connect.ust.hk>

* correct wrong markdown syntax (vllm-project#14414)

Signed-off-by: vincent-pli <justdoit.pli@gmail.com>

* [Bugfix] Further clean up LoRA test (vllm-project#14422)

Signed-off-by: Jee Jee Li <pandaleefree@gmail.com>

* [Bugfix] Clean up multi-modal processors (vllm-project#14417)

Signed-off-by: DarkLight1337 <tlleungac@connect.ust.hk>

* [Misc] Set default value of seed to None (vllm-project#14274)

Signed-off-by: மனோஜ்குமார் பழனிச்சாமி <smartmanoj42857@gmail.com>

* [BUGFIX] Skip tokenization support for throughput benchmark (vllm-project#12712)

Signed-off-by: root <root@banff-cyxtera-s73-5.ctr.dcgpu>
Signed-off-by: Aleksandr Malyshev <maleksan@amd.com>
Co-authored-by: root <root@banff-cyxtera-s73-5.ctr.dcgpu>
Co-authored-by: Aleksandr Malyshev <maleksan@amd.com>

* Fix missing `kv_caches` and `attn_metadata` in `OpenVINOCausalLM` (vllm-project#14271)

Signed-off-by: Harry Mellor <19981378+hmellor@users.noreply.github.com>

* Use the optimized block sizes after tuning the kernel. (vllm-project#14329)

* [V1][Core] Support for Structured Outputs (vllm-project#12388)

Signed-off-by: Aaron Pham <contact@aarnphm.xyz>
Signed-off-by: Russell Bryant <rbryant@redhat.com>
Co-authored-by: Russell Bryant <rbryant@redhat.com>
Co-authored-by: Michael Goin <mgoin64@gmail.com>
Co-authored-by: Nick Hill <nhill@redhat.com>

* [Doc] Update prefix_caching.md to match the example image (vllm-project#14420)

* [Benchmarks] Make detokenization optional in benchmark scripts (vllm-project#11697)

Signed-off-by: Jeremy Arnold <Jeremy.Arnold@amd.com>

* comments

Signed-off-by: Sage Moore <sage@neuralmagic.com>

* [Kernel] optimize performance of gptq marlin kernel when n is small (vllm-project#14138)

Signed-off-by: Jinzhen Lin <linjinzhen@hotmail.com>

* [Misc] Add Phi4-MM example (vllm-project#14343)

Signed-off-by: Jee Jee Li <pandaleefree@gmail.com>

* [v1] torch.compile integration explanation (vllm-project#14437)

Signed-off-by: youkaichao <youkaichao@gmail.com>

* [V1] Eagerly remove finished requests from the batch (vllm-project#14388)

Signed-off-by: Nick Hill <nhill@redhat.com>

* [V1][Metrics] Fix traceback with preemptions+LoRA (vllm-project#14220)

Signed-off-by: Mark McLoughlin <markmc@redhat.com>

* [Bugfix] Fix torch_xla which can't handle None seed introduced in vllm-project#14274 (vllm-project#14459)

Signed-off-by: Yarong Mu <ymu@google.com>

* [V1] Prompt logprobs + APC compatibility; prompt logprobs reqs cannot fill APC (vllm-project#13949)

* [Bugfix][V1] Handle MLA in kv_cache_interface (vllm-project#14462)

Signed-off-by: Tyler Michael Smith <tyler@neuralmagic.com>

* Revert "[Perf] Reduce MLA CPU overheads in V1 (vllm-project#14384)" (vllm-project#14471)

* [Bugfix][Disaggregated] Add a check in send_kv_caches_and_hidden_states and fix the reshape of the KVCache (vllm-project#14369)

Signed-off-by: Mathis Felardos <mathis@mistral.ai>

* [MISC][V1] Register process killing handler only in the main thread (vllm-project#14380)

Signed-off-by: Cody Yu <hao.yu.cody@gmail.com>

* [core] add `extra_args` to `SamplingParams` (vllm-project#13300)

Signed-off-by: Aviv Keshet <akeshet@scaledcognition.com>

* [CI/Build] refactor: set timezone of container to UTC (vllm-project#12888)

Signed-off-by: Roger Meier <r.meier@siemens.com>

* Default to `generation_config` from model (vllm-project#12622)

Signed-off-by: Harry Mellor <19981378+hmellor@users.noreply.github.com>

* [Doc]add doc for Qwen models tool calling (vllm-project#14478)

Signed-off-by: WangErXiao <863579016@qq.com>

* [Doc] Added QwQ-32B to the supported models list in the reasoning out… (vllm-project#14479)

Signed-off-by: WangErXiao <863579016@qq.com>

* [Bugfix] Make the deviceprofiler include LoRA memory. (vllm-project#14469)

Signed-off-by: Jee Jee Li <pandaleefree@gmail.com>

* Add training doc signposting to TRL (vllm-project#14439)

Signed-off-by: Harry Mellor <19981378+hmellor@users.noreply.github.com>

* [Build/BugFix] Fix hopper 12.8 build (vllm-project#14354)

Signed-off-by: Lucas Wilkinson <lwilkins@redhat.com>
Signed-off-by: Lucas Wilkinson <lwilkinson@neuralmagic.com>
Signed-off-by: Tyler Michael Smith <tyler@neuralmagic.com>
Co-authored-by: Tyler Michael Smith <tyler@neuralmagic.com>

* Add RLHF document (vllm-project#14482)

Signed-off-by: Harry Mellor <19981378+hmellor@users.noreply.github.com>

* [CI/Build] Use a fixed seed to avoid flaky tests (vllm-project#14480)

Signed-off-by: DarkLight1337 <tlleungac@connect.ust.hk>

* [V1] TPU - Add tensor parallel support via Ray (vllm-project#13618)

Signed-off-by: Alexander Matveev <amatveev@redhat.com>

* [VLM] Add TP support for Phi-4-MM (vllm-project#14453)

Signed-off-by: Isotr0py <2037008807@qq.com>

* [Misc] add `use_tqdm_on_load` to reduce logs (vllm-project#14407)

Signed-off-by: Aaron Pham <contact@aarnphm.xyz>

* [V1][Core] Fix memory issue with logits & sampling (vllm-project#13776)

Signed-off-by: Roger Wang <ywang@roblox.com>

* [benchmarks] Add option to use unique jsonschema for each request (vllm-project#14457)

Signed-off-by: Russell Bryant <rbryant@redhat.com>

* [Misc] Don't run ruff at all on 3rd party libs (vllm-project#14493)

Signed-off-by: DarkLight1337 <tlleungac@connect.ust.hk>

* Move requirements into their own directory (vllm-project#12547)

Signed-off-by: Harry Mellor <19981378+hmellor@users.noreply.github.com>

* [Bugfix] DeepSeek Accuracy (vllm-project#14476)

Signed-off-by: Lucas Wilkinson <lwilkins@redhat.com>

* [Bugfix] Fix profiling OOM and decouple encoder multimodal profiling (vllm-project#14361)

Signed-off-by: Isotr0py <2037008807@qq.com>

* Update CODEOWNERS for structured output (vllm-project#14496)

Signed-off-by: Russell Bryant <rbryant@redhat.com>

* [Misc] Upgrade to Python 3.9 typing for additional directories (vllm-project#14492)

Signed-off-by: DarkLight1337 <tlleungac@connect.ust.hk>

* [V1] Support bad_words in sampler (vllm-project#13376)

Signed-off-by: 22quinn <33176974+22quinn@users.noreply.github.com>
Co-authored-by: Nick Hill <nhill@redhat.com>

* Revert "[V1][Core] Fix memory issue with logits & sampling" (vllm-project#14504)

Signed-off-by: Roger Wang <ywang@roblox.com>
Co-authored-by: Roger Wang <ywang@roblox.com>

* [Attention] Default to FlashMLA backend for MLA (vllm-project#14451)

Signed-off-by: Lucas Wilkinson <lwilkinson@neuralmagic.com>
Signed-off-by: Tyler Michael Smith <tyler@neuralmagic.com>
Co-authored-by: Tyler Michael Smith <tyler@neuralmagic.com>

* [V1][TPU] Remove unnecessary padding for running on TPU. (vllm-project#14467)

* [Feat] Support chunked prefill for LMCache connector (vllm-project#14505)

Signed-off-by: YaoJiayi <120040070@link.cuhk.edu.cn>

* [Bugfix] Fix tqdm progress bar when SamplingParams.n > 1 (vllm-project#12428)

Signed-off-by: Yuchen Yan <740987012@qq.com>

* [Bugfix] Revert QKVCrossParallelLinear usage in Mllama to keep BNB quantization work (vllm-project#14498)

Signed-off-by: Isotr0py <2037008807@qq.com>

* [Hardware][TPU] Fix the recompiling issue in logits processor after warmup (vllm-project#14510)

Signed-off-by: Chengji Yao <chengjiyao@google.com>

* [Misc] Ensure out-of-tree quantization method recognize by cli args (vllm-project#14328)

Signed-off-by: liuyanyi <wolfsonliu@163.com>

* [Bugfix] Wrong requirements path - rocm (vllm-project#14527)

Signed-off-by: Martin Hoyer <mhoyer@redhat.com>

* [Feature] Consolidate performance benchmark datasets (vllm-project#14036)

Signed-off-by: Jennifer Zhao <7443418+JenZhao@users.noreply.github.com>
Signed-off-by: Roger Wang <ywang@roblox.com>
Co-authored-by: Jennifer Zhao <7443418+JenZhao@users.noreply.github.com>
Co-authored-by: Roger Wang <ywang@roblox.com>

* [Misc] Add log information for handle_process_request. (vllm-project#14130)

Signed-off-by: chaunceyjiang <chaunceyjiang@gmail.com>

* [Docs] Mention `model_impl` arg when explaining Transformers fallback (vllm-project#14552)

Signed-off-by: Harry Mellor <19981378+hmellor@users.noreply.github.com>

* [Frontend] support image embeds (vllm-project#13955)

Signed-off-by: chaunceyjiang <chaunceyjiang@gmail.com>

* [Kernel] Add more dtype support for GGUF kernels (vllm-project#14043)

Signed-off-by: SzymonOzog <szymon.ozog@aleph-alpha.com>
Signed-off-by: SzymonOzog <szymon.ozog@gmail.com>

* [Doc] Update PaliGemma note to a warning (vllm-project#14565)

Signed-off-by: DarkLight1337 <tlleungac@connect.ust.hk>

* V1 rocm support (#469)

* Initial commit for V1 successfull compilation

* Small improvement for linear

* Small improvement for linear

* making use of forward_cuda for all except ROPE in llama

---------

Co-authored-by: maleksan85 <maleksan@amd.com>

* nightly_fixed_aiter_integration_final_20250305 README update (#470)

* nightly_fixed_aiter_integration_final_20250305 README update (perf results only)

* Update Docker Manifest git hash

* Update Docker Manifest and added nightly_fixed_aiter_integration_final_20250305

* some more updates

* Update AITER section with example

* Updated AITER command with larger batch size and model name

* Fixing typo

* Removed --max-model-len in AITER command

* Updating AITER instructions

* typo

* Another typo

* Whitespace

* modifying whats new section

* Another typo

---------

Co-authored-by: arakowsk-amd <182798202+arakowsk-amd@users.noreply.github.com>
Co-authored-by: Gregory Shtrasberg <156009573+gshtras@users.noreply.github.com>

---------

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Co-authored-by: 22quinn <33176974+22quinn@users.noreply.github.com>
Co-authored-by: Roger Wang <ywang@roblox.com>
Co-authored-by: Jiayi Yao <82156730+YaoJiayi@users.noreply.github.com>
Co-authored-by: Yuchen Yan <50619811+yanyc428@users.noreply.github.com>
Co-authored-by: Martin Hoyer <mhoyer@redhat.com>
Co-authored-by: Jennifer Zhao <JenZhao@users.noreply.github.com>
Co-authored-by: Jennifer Zhao <7443418+JenZhao@users.noreply.github.com>
Co-authored-by: Chauncey <chaunceyjiang@gmail.com>
Co-authored-by: Szymon Ożóg <58388001+SzymonOzog@users.noreply.github.com>
Co-authored-by: Gregory Shtrasberg <Gregory.Shtrasberg@amd.com>
Co-authored-by: Gregory Shtrasberg <156009573+gshtras@users.noreply.github.com>
Co-authored-by: Mcirino1 <57415822+Mcirino1@users.noreply.github.com>
Co-authored-by: arakowsk-amd <182798202+arakowsk-amd@users.noreply.github.com>
captainzmc pushed a commit to captainzmc/vllm that referenced this pull request Mar 12, 2025
…lm-project#12325)

Signed-off-by: NickLucche <nlucches@redhat.com>
Signed-off-by: NickLucche <nick@nlucches-4xa100.c.openshift-330514.internal>
Co-authored-by: NickLucche <nick@nlucches-4xa100.c.openshift-330514.internal>
lulmer pushed a commit to lulmer/vllm that referenced this pull request Apr 7, 2025
…lm-project#12325)

Signed-off-by: NickLucche <nlucches@redhat.com>
Signed-off-by: NickLucche <nick@nlucches-4xa100.c.openshift-330514.internal>
Co-authored-by: NickLucche <nick@nlucches-4xa100.c.openshift-330514.internal>
Signed-off-by: Louis Ulmer <ulmerlouis@gmail.com>
shreyankg pushed a commit to shreyankg/vllm that referenced this pull request May 3, 2025
…lm-project#12325)

Signed-off-by: NickLucche <nlucches@redhat.com>
Signed-off-by: NickLucche <nick@nlucches-4xa100.c.openshift-330514.internal>
Co-authored-by: NickLucche <nick@nlucches-4xa100.c.openshift-330514.internal>
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