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iGEM/UCSD evolutionary biology and bioinformatics group

30 followers
Philadelphia
http://lab.hyphy.org

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hyphy hyphy Public

HyPhy: Hypothesis testing using Phylogenies

HyPhy 234 69
hivtrace hivtrace Public

JavaScript 25 15
phylotree.js phylotree.js Public

Interactive viewer of phylogenetic trees

JavaScript 181 77

Repositories

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All C# C++ CSS Dockerfile Go HTML HyPhy JavaScript Julia Jupyter Notebook Nextflow PostScript Python R Ruby SCSS Shell Svelte TeX TypeScript

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Showing 10 of 98 repositories

datamonkey-js Public
Datamonkey - Run state-of-the-art statistical models through the comfort of your browser

veg/datamonkey-js’s past year of commit activity

JavaScript 10 9 0 8 Updated Jul 18, 2025
hyphy Public
HyPhy: Hypothesis testing using Phylogenies

veg/hyphy’s past year of commit activity

HyPhy 234 69 11 1 Updated Jul 17, 2025
tn93 Public
TN93 fast distance calculator

veg/tn93’s past year of commit activity

C++ 18 MIT 7 10 1 Updated Jul 16, 2025
CAPHEINE Public
Automated evolutionary annotation of existing datasets using Nextflow

veg/CAPHEINE’s past year of commit activity

Nextflow 0 MIT 0 4 1 Updated Jul 14, 2025
cawlign Public

veg/cawlign’s past year of commit activity

C++ 3 MIT 2 4 0 Updated Jul 9, 2025
hivtrace-viz Public

veg/hivtrace-viz’s past year of commit activity

JavaScript 10 10 0 0 Updated Jun 28, 2025
datamonkey-js-server Public

veg/datamonkey-js-server’s past year of commit activity

JavaScript 3 7 0 2 Updated Jun 26, 2025
hyphy-eye Public
Playing w Observable Framework

veg/hyphy-eye’s past year of commit activity

JavaScript 0 1 2 1 Updated Jun 24, 2025
DRHIP Public
Data Reduction for HyPhy with Inference Processing. A toolkit for analyzing and summarizing HyPhy evolutionary selection analysis results

veg/DRHIP’s past year of commit activity

Python 0 MIT 0 0 0 Updated Jun 13, 2025
hivtrace Public

veg/hivtrace’s past year of commit activity

JavaScript 25 MIT 15 5 1 Updated May 21, 2025

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