Explore JBrowse

[victorskl]

Context:

• https://jbrowse.org/jb2/
• https://github.com/GMOD/jbrowse-components

[andrewpatto]

The following is not specifically the React component - but has general info about configuring any embedded view

https://jbrowse.org/jb2/docs/tutorials/embed_linear_genome_view/01_introduction/

[andrewpatto]

Works fine out of the box as a react component - though worth noting that its react version is a more limited single view - and some of the needed UI components (track selectors etc) would have to be added around this view to get proper functionality (which is a good thing, but still is work)

[andrewpatto]

There doesn't seem to be any support for authentication with the htsget endpoint - so this is something that would need to be added.
https://github.com/GMOD/bam-js/blob/master/src/htsget.ts

[andrewpatto]

htsget is only supported for BAMs currently