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Replace 'hub' with 'ingest' in any github url to get a prompt-friendly extract of a codebase

Python 7,236 574 Updated Mar 7, 2025

A single cell RNA-seq reference map of human hematopoietic development in the bone marrow, with balanced representation of hematopoietic stem and progenitor cells and differentiated populations

R 36 6 Updated Nov 2, 2024

5D Diplomacy With Multiverse Time Travel

C# 936 78 Updated Mar 8, 2025
Python 9 Updated Mar 10, 2025

Master programming by recreating your favorite technologies from scratch.

Markdown 351,878 32,635 Updated Sep 3, 2024

A collective list of free APIs

Python 330,013 34,968 Updated Oct 31, 2024

A natural language interface for computers

Python 58,646 5,001 Updated Jan 24, 2025

Using Graph Neural Networks (GNNs) for combinatorial optimization (CO) offers specific advantages for problems where traditional methods struggle due to complexity, data dependency, or the need forโ€ฆ

Python 3 Updated Nov 23, 2024

๐Ÿค– ๐—Ÿ๐—ฒ๐—ฎ๐—ฟ๐—ป for ๐—ณ๐—ฟ๐—ฒ๐—ฒ how to ๐—ฏ๐˜‚๐—ถ๐—น๐—ฑ an end-to-end ๐—ฝ๐—ฟ๐—ผ๐—ฑ๐˜‚๐—ฐ๐˜๐—ถ๐—ผ๐—ป-๐—ฟ๐—ฒ๐—ฎ๐—ฑ๐˜† ๐—Ÿ๐—Ÿ๐—  & ๐—ฅ๐—”๐—š ๐˜€๐˜†๐˜€๐˜๐—ฒ๐—บ using ๐—Ÿ๐—Ÿ๐— ๐—ข๐—ฝ๐˜€ best practices: ~ ๐˜ด๐˜ฐ๐˜ถ๐˜ณ๐˜ค๐˜ฆ ๐˜ค๐˜ฐ๐˜ฅ๐˜ฆ + 12 ๐˜ฉ๐˜ข๐˜ฏ๐˜ฅ๐˜ด-๐˜ฐ๐˜ฏ ๐˜ญ๐˜ฆ๐˜ด๐˜ด๐˜ฐ๐˜ฏ๐˜ด

Python 3,686 606 Updated Mar 6, 2025

Investment Research for Everyone, Everywhere.

Python 36,678 3,322 Updated Mar 10, 2025

Open-source no-code web data extraction platform. Turn websites to APIs & spreadsheets with no-code robots in minutes.

TypeScript 9,520 748 Updated Mar 8, 2025

This repository contains all code used for the Human Lung Cell Atlas project.

Jupyter Notebook 48 14 Updated Aug 21, 2023

Dora is an experiment management framework. It expresses grid searches as pure python files as part of your repo. It identifies experiments with a unique hash signature. Scale up to hundreds of expโ€ฆ

Python 281 22 Updated Oct 5, 2023

This is a python script that allows for batch processing of AlphaFold3 output files

Python 14 1 Updated Oct 13, 2024

๐Ÿš€๐Ÿค– Crawl4AI: Open-source LLM Friendly Web Crawler & Scraper. Don't be shy, join here: https://discord.gg/mEkkMXFG

Python 32,877 2,792 Updated Mar 9, 2025

High accuracy RAG for answering questions from scientific documents with citations

Python 7,050 693 Updated Mar 7, 2025

Deciphering cell-cell communication from spatially resolved transcriptomic data at single-cell resolution with subgraph-based attentional graph neural network

Jupyter Notebook 23 Updated Sep 6, 2024

This repository contains the scripts developed for the analysis of CRC samples processed with the 10x VISIUM Spatial Transcriptomics technology

Jupyter Notebook 11 2 Updated Feb 7, 2023

This repository provides tutorials and implementations for various Generative AI Agent techniques, from basic to advanced. It serves as a comprehensive guide for building intelligent, interactive Aโ€ฆ

Jupyter Notebook 8,724 1,131 Updated Mar 9, 2025

Knowledge-graph-based cell-cell communication inference for spatially resolved transcriptomic data

R 65 18 Updated Jan 17, 2025

"Orchestrating Spatial Transcriptomics Analysis with Bioconductor" book

TeX 63 24 Updated Mar 7, 2025

R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics

R 364 59 Updated Dec 11, 2024

Clone Calling from Visium Spatial Transcriptomics of Cancer samples

HTML 61 14 Updated Dec 8, 2022

Comprehensive mapping of tissue cell architecture via integrated single cell and spatial transcriptomics (cell2location model)

Python 338 60 Updated Mar 3, 2025

Spatial transcriptomics of heart tissue

Jupyter Notebook 81 39 Updated Oct 7, 2023

The best collection of AI tutorials to make you a boss of Data Science!

Python 86 20 Updated Dec 28, 2024

collections for advanced, novel multi-view clustering methods(papers , codes and datasets)

565 117 Updated Mar 10, 2023

A long journey from 2009 till nowadays with graphs

Python 7 Updated Oct 18, 2021

Repository for benchmarking graph neural networks (JMLR 2023)

Jupyter Notebook 2,566 455 Updated Jun 22, 2023

Must-read papers on graph neural networks (GNN)

16,270 3,015 Updated Dec 20, 2023
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