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Fix bug in chgres_cube subroutine search_many #808

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LarissaReames-NOAA
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@LarissaReames-NOAA LarissaReames-NOAA commented Apr 10, 2023

DESCRIPTION OF CHANGES:

There was a bug with an unallocated array being used on all PETs in a call to search_many when it only needed to be used on the head node. I fixed this is in all calls to search_many subroutine, including the unit test for this routine.

TESTS CONDUCTED:

Consistency and unit tests, with code compiled in debug mode, passed on Jet.

DEPENDENCIES:

N/A

DOCUMENTATION:

No documentation changes needed.

ISSUE:

Fixes #797

CONTRIBUTORS (optional):

N/A

@LarissaReames-NOAA LarissaReames-NOAA added the bug Something isn't working label Apr 10, 2023
@LarissaReames-NOAA
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LarissaReames-NOAA commented Apr 10, 2023

All of the tests appear to be failing in places that have nothing to do with anything I've changed, so I'm not really sure how to rectify that. This certainly goes back to our discussions in our last management meeting about having so many tests that constantly need updating but that aren't adding much value.

It looks like all of the GitHub actions still use nceplibs which we no longer use for modules, instead using hpc-stack, so some library versions required by UFS_UTILS aren't available. Should we create an issue to update the actions to source and build hpc-stack instead?

@GeorgeGayno-NOAA
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All of the tests appear to be failing in places that have nothing to do with anything I've changed, so I'm not really sure how to rectify that. This certainly goes back to our discussions in our last management meeting about having so many tests that constantly need updating but that aren't adding much value.

It looks like all of the GitHub actions still use nceplibs which we no longer use for modules, instead using hpc-stack, so some library versions required by UFS_UTILS aren't available. Should we create an issue to update the actions to source and build hpc-stack instead?

Don't worry about the failing tests. They are failing for reasons other than errors in our codes. @arunchawla-NOAA is aware of the problem.

@GeorgeGayno-NOAA
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Does argument field_data_2d need to be an argument of search_many? The routine does a FieldGather and FieldScatter on that array. Can it be declared locally? Because the routine expects field_data_2d to be dimensioned as i_target and j_target. And on most tasks, that array is dimensioned as (0,0). I wonder if that would cause problems.

@GeorgeGayno-NOAA
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Checked out the branch at 36fc338 on WCOSS2. The doxygen built with no warnings. All regression tests passed.

Then, recompiled the branch using 'Debug' mode. All regression tests completed without error. There were very small differences with the baseline data, which were likely due to the different compiler options used in 'Debug' mode. Importantly, the fix to search_many is working.

@GeorgeGayno-NOAA GeorgeGayno-NOAA merged commit 5101237 into ufs-community:develop Apr 12, 2023
AnnetteGibbs-NOAA added a commit to AnnetteGibbs-NOAA/UFS_UTILS that referenced this pull request Jul 3, 2023
* origin/develop:
  Update ccpp submodule (ufs-community#827)
  Change length of character variable "mosaic_name" in "make_solo_mosaic.c" (ufs-community#824)
  Update GDAS INIT utility for GFS COM reorganization (ufs-community#820)
  Add backup calculation for orography and mask generation (ufs-community#713)
  Improve repository build script (ufs-community#819)
  Use latest wgrib2 executable on Jet. (ufs-community#816)
  chgres_cube - Minor update for high-resolution grids . (ufs-community#814)
  Update PR template (ufs-community#813)
  global_cycle - Add soil moisture nudging for NoahMP option (ufs-community#809)
  Release v1.10.0 (ufs-community#807)
  Run sfc_climo_gen utility on Hera (ufs-community#791)
  Fix bug in chgres_cube subroutine search_many (ufs-community#808)
  sfc_climo_gen - Output fractions of each vegetation/soil type category (ufs-community#748)
  Replace w3nco library with w3emc (ufs-community#802)
  Fix Debug compilation (ufs-community#800)
  Update WCOSS2 build module to use new ESMF v8.4.1 library. (ufs-community#799)
  Update chgres_cube documentation for duplicate grib2 records (ufs-community#795)
  Use latest Cray modules on WCOSS2 (ufs-community#792)
  Remove checksum attribute from global_cycle restart files (ufs-community#794)
  Remove goto statements from chgres_cube (ufs-community#775)
  FVCOM_TOOLS - Remove dependency on module_nwp_base.f90 (ufs-community#790)
  Remove "gcovr" step from the 'developer' workflow (ufs-community#785)
  Update build module for Cheyenne (ufs-community#783)
  GDAS Init utility - consolidate the copy of coldstart files (ufs-community#773)
  Remove support for ODIN machine (ufs-community#782)
  Update GDAS INIT utility to optionally use fracoro data (ufs-community#741)
  Option to build only application specific utilities (e.g. GFS) (ufs-community#777)
  Use combined IP/IP2 library (ufs-community#695)
  Initial updates to global_cycle for Noah-MP land model (ufs-community#774)
  New resolution options for the cpld_gridgen utility (ufs-community#769)
  Use new EPIC-maintained hpc-stack on Jet  (ufs-community#771)
  Update GDAS initialization scripts for the new ENKF directory (ufs-community#764)
  Reduce memory usage in chgres_cube (ufs-community#766)
  Detect duplicate vertical levels in chgres_cube. (ufs-community#767)
  Point to new input orography directory. (ufs-community#758)
  Release version 1.9 (ufs-community#754)
  HAFSv1 grid nesting updates (ufs-community#752)
  Remove compiler warnings from chgres_cube (ufs-community#747)
  chgres_cube: Split input_data module into to 3 separate modules (ufs-community#744)
  More work on CI, checking with different versions of ESMF (ufs-community#742)
  Add processing of soil color to sfc_climo_gen (ufs-community#721)
  more work on CI - added Linux_versions workflow (ufs-community#739)
  Add TEST_FILE_DIR option to CMake build, where test data files can be found instead of using FTP.  (ufs-community#732)
  adding developer workflow (ufs-community#724)
  Update GDAS INIT utility for v16.3. (ufs-community#723)
  OROG_GSL - Remove negative bias in orographic asymmetery (OA) fields (ufs-community#718)
  Incorporate BNU soil type data (ufs-community#717)
  High-resolution MODIS and STATSGO veg/soil data. (ufs-community#703)
  Run WCOSS2 consistency tests under role account (ufs-community#711)
  Fix macOS CI workflow (ufs-community#715)
  Add utility codes to create BNU soil texture data (ufs-community#707)
  Update chgres_cube to output netcdf4 file. (ufs-community#704)
  Incorporate high-res global VIIRS vegetation data. (ufs-community#699)
  Run grid_gen consistency tests in parallel. (ufs-community#697)
  Fix error handling in "link_fixdirs.sh". Add -L to the copy command. (ufs-community#701)
  Update for new fixed data directory structure (ufs-community#688)
  Add WCOSS2 support for tests (ufs-community#693)
  Increase test data pull timeout (ufs-community#692)
  Option to install binaries to any directory. (ufs-community#685)
  Update global_cycle to use the latest CCPP version of sfcsub.F (ufs-community#671)
  Incorporate weight_gen program. (ufs-community#677)
  Add install of jpeg-turbo to macos workflows (ufs-community#684)
  Improve logic in regression test driver script (ufs-community#681)
  Release v1.8 (ufs-community#679)
  Update link_fixdirs.sh for new data directories (ufs-community#672)
  Update default ice climatology in ./ush/global_cycle.sh. (ufs-community#664)
  Remove all references to WCOSS 1 from UFS_UTILS (ufs-community#667)
  Update workflows to use latest macOS and ubuntu (ufs-community#675)
  Update GDAS Initialization utility for recent HPSS tarball name change (ufs-community#666)
  Port UFS_UTILS to WCOSS2 (ufs-community#642)
  Fix chgres_cube to process GEFS GRIB2 data (ufs-community#658)
  Update global_cycle_driver.sh for GFS OPS directory convention  (ufs-community#655)
  Update documentation for SRW App (ufs-community#656)
  New coupled model utility (ufs-community#647)
  Update support for S4 and enable regression testing (ufs-community#654)
  global_cycle - Link to CCPP version of sfcsub.F (ufs-community#636)
  Add processing of new global AFWA snow data to emcsfc_snow2mdl. (ufs-community#648)
  Update build module on Cheyenne (ufs-community#646)
  Move to Intel 2022 on Jet, Hera and Orion (ufs-community#650)
  Host doxygen documentation for multiple releases (ufs-community#644)
  Download unit test data as part of the CMake build (ufs-community#630)
  chgres_cube - Complete removal of wgrib2 library (ufs-community#641)
  Eliminate circular dependency in chgres_cube
  Update workflow files to pull netcdf-c library from GitHub
  chgres_cube - Remove the wgrib2 library from the GRIB2 data read routines.
  Undefined symbols on macOS with Intel compiler (ufs-community#628)
  Update FVCOM code to handle sub-domain restart files using multiple cores. (ufs-community#624)
  chgres_cube - Run routine 'convert_omega' on all tasks. (ufs-community#627)
  Use ESMF 8.2.0 library
  Automate update of consistency test baseline data. (ufs-community#603)
  Update workflow files to use newer versions of ESMF and NCEPLIBS. (ufs-community#617)
  Update build modules to be lua compliant (ufs-community#614)
  Allow FVCOM tools to Update Ice Surface Roughness Length (ufs-community#604)
  Update the requested memory in the Orion chgres_cube consistency test script (ufs-community#611)
  Use copy of grib_util under Jet role account. (ufs-community#608)
  Run consistency tests on Orion using role account (ufs-community#606)
  Run consistency tests on Hera using role account (ufs-community#605)
  Run consistency tests on Jet using role account. (ufs-community#607)
  Update more documentation after move to ufs-community (ufs-community#597)
  fvcom_tools - Add option to process 'cold' or 'warm' restart files (ufs-community#595)
  Update documentation after move to ufs-community (ufs-community#594)
  chgres_cube - Eliminate segmentation fault in input_data.F90 (ufs-community#585)
  Update to language of unit test README to match that in unit test.
  chgres_cube - Simplify surface processing using field bundles (ufs-community#572)
  Add compiler flags for GNU Fortran v10 or newer compilers. (ufs-community#583)
  Move verbose output from example unit test to be commented to streamline test output.
  Updates to test README to add instructions for use of example unit test.
  Add Findwgrib2.cmake (ufs-community#578)
  Added unit test to be used as an instructional example for new users.
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chgres_cube - problem with call to routine "search_many"
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