This directory contains the jupyter notebooks used in the projects.
Please delete this section and replace it with your own if you are using this template.
It would be good to annotate here what each notebook was used for. For example, if you have a notebook called 01_data_cleanup.ipynb
, you can write a short description of what it is here.
01_data_cleanup.ipynb: cleans up the data and prepares it for analysis. Includes celltype annotation and QC. Haven't done the clustering yet.
02_clustering.ipynb: clusters the data using the Louvain algorithm