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start with assembled genomes / cgMLST #297

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shlomobl opened this issue May 19, 2022 · 1 comment

shlomobl commented May 19, 2022

Hi,

Is it possible to start the pipeline with assembled genomes? (if not, that would be a nice addition)
Can you add cgMLST to the analysis? (using PubMLST schemes)
Thanks!

safrye commented Oct 24, 2022

Have a look at #243 for Torstens answer.

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