A python parser to simplify and build the VCF (Variant Call Format).
Clinical Whole Genome and Exome Sequencing Pipeline
Human mitochondrial variants annotation using HmtVar.
Library for indexing VCF files for random access searches by rsID
The DKFZ-ODCF, formerly DKFZ/eilslabs SNV-Calling Workflow
Neighborhood-Aware Variant Impact Predictor
GPF: Genotypes and Phenotypes in Families
OpenCRAVAT as a GenePattern module
ASFV-ONT-Gen is a pipeline for analyzing African Swine Fever Virus (ASFV) whole-genome sequencing data generated using Oxford Nanopore Technology (ONT). It supports genome assembly & assembly statistics, variant calling, annotation & phylogenetic analysis, enabling rapid genomic insights for surveillance & outbreak investigation
Add a description, image, and links to the variant-annotation topic page so that developers can more easily learn about it.
To associate your repository with the variant-annotation topic, visit your repo's landing page and select "manage topics."