unicycler

Here are 4 public repositories matching this topic...

fmalmeida / MpGAP

Multi-platform genome assembly pipeline for Illumina, Nanopore and PacBio reads

workflow nanopore pipeline nextflow reproducible-research reproducible-science pacbio polish illumina spades genome-assembly hybrid-assemblies unicycler flye canu pilon

Updated Sep 9, 2024
Nextflow

wennj / plasmid-collapse-gene-loss-unicycler-galaxy

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Accompanying information to a scientific publication on the assembly of bacterial genomes using Illumina and nanopore sequencing data using Unicylcer.

bioinformatics-pipeline galaxy oxford-nanopore genome-assembly illumina-sequencing multiplicities bacterial-genomes nanopore-sequencing galaxy-workflow minion-sequencer unicycler plasmid-prediction

Updated Jan 10, 2024
R

pommevilla / snakemake-genome-assembly-practice

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bioinformatics snakemake genome-assembly fastp unicycler bbduk checkm2

Updated Nov 27, 2023
Python

wanyuac / Assembly_toolkit

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Scripts for de novo genome assembly

bioinformatics genomics bioinformatics-pipeline spades de-novo-assembly unicycler

Updated Nov 17, 2024
Shell

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unicycler

Here are 4 public repositories matching this topic...

fmalmeida / MpGAP

wennj / plasmid-collapse-gene-loss-unicycler-galaxy

pommevilla / snakemake-genome-assembly-practice

wanyuac / Assembly_toolkit

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