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tximport

Here are 2 public repositories matching this topic...

complextissue / pytximport

Feature-rich Python implementation of the tximport package for gene count estimation.

python bioinformatics rna-seq deseq2 rna tximport anndata scverse

Updated Oct 24, 2025
Python

tdayris-perso / rna-dge-salmon-deseq2

Perform differential analysis from FastQ files with Salmon, tximport, and DESeq2

reproducible-research bioinformatics-pipeline deseq2 salmon differential-expression snakemake-workflows tximport

Updated Aug 18, 2021
Python

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