code repository for Lagattuta et al. "Repertoire analyses reveal T cell receptor sequence features that influence T cell fate." Nat. Imm. (2022)
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Updated
Jan 28, 2025 - Jupyter Notebook
code repository for Lagattuta et al. "Repertoire analyses reveal T cell receptor sequence features that influence T cell fate." Nat. Imm. (2022)
Tools for finding Total RNA Expression Genes in single nucleus RNA-seq data
Treg免疫細胞系譜を例に、RAPTORアルゴリズムを実装したGPU加速対応のRAG(Retrieval-Augmented Generation)システムです。実際に、5ノードから14ノードを実現しました。
PubMedから実際のTreg関連文献を収集し、Enhanced Treg Vocabulary(7層316用語)を用いて高精度に分類。品質評価指標(Silhouette + DBI)に基づく最適クラスタリングでRAPTORツリーを構築します。
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