Segmentation of the thalamus into 11 nuclei and MTT using white-matter-nulled MPRAGE MRI image contrast with support now for standard MPRAGE also (Version 2.1) This is OBSOLETE. Please use http://github.com/thalamicseg/hipsthomasdocker which is the latest and maintained © Copyright Manojkumar Saranathan 2021-2025
Recurrent Neural Networks of Mediodorsal Thalamus and Prefrontal Cortex in Temporal Contexts
Analysis and modeling code for Jajcay et al. "Cross-frequency slow oscillation-spindle coupling in a biophysically realistic thalamocortical neural mass model "
Segmentation of the thalamus into twelve of its nuclei using the white-matter-nulled MPRAGE MRI image contrast.
A tool for extracting diffusion-based brain connectivity
Synthetic Thalamus is a biologically-inspired neural attention mechanism that mimics the brain's thalamic circuits. This project implements a selective information bottleneck with phase-based synchronization, contrastive learning, and recurrent feedback loops.
Large-scale thalamocortical network model for simulating physiological and paroxysmal brain rhythms: version 1
Large-scale thalamocortical network model for simulating physiological and paroxysmal brain rhythms: version 2
Illustrative model of activity modulation in Reticular Nucleus (RN) by Midbrain Reticular Formation (MRF) supporting Thalamic gating.
Add a description, image, and links to the thalamus topic page so that developers can more easily learn about it.
To associate your repository with the thalamus topic, visit your repo's landing page and select "manage topics."