High-resolution strain-level microbiome composition analysis tool based on reference genomes and k-mers
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Apr 8, 2024 - Python
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strains
Here are 8 public repositories matching this topic...
Strain-level abundances estimation in metagenomic samples using variation graphs
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Jan 29, 2023 - Python
🍀 Scraps data from Leafly and collects amazing weed-based meta-data.
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Sep 22, 2022 - Python
Detect and phase minor SNVs from long-read sequencing data
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Dec 28, 2021 - C++
A Julia package for fitting the equation of state of solids, and more
equation-of-state
solid-state-physics
julia-package
solids
thermodynamic-properties
solve
strains
fitting-curve
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Nov 14, 2024 - Julia
ORI (Oxford nanopore Reads Identification) is a software allowing, from long nanopore reads, to identify the bacterial strains present in a sample.
nanopore
classification
identification
minion
spaced-seed
long-reads
ori
strains
howdesbt
strains-identification
bacterial-strains
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Apr 1, 2022 - C++
Prediction infectious strains of Influenza A virus for human
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Aug 26, 2023 - Python
Computational tool for prioritizing the genetic candidates based on the protein functional and regulatory features
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Dec 9, 2020 - Python
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