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starr-seq

Here are 3 public repositories matching this topic...

ParkerLab / STARR-seq-Analysis-Pipeline

Commands Template and Module for Automated Analysis of STARR-seq data.

template pipeline tool software starr-seq

Updated Feb 15, 2019
Python

deeprob / starrseq_results

Codebase for manuscript titled "Quantifying the impact of mutations on enhancer dynamics"

deep-learning genomics gene-regulation enhancers starr-seq multi-omics-integration

Updated Oct 21, 2025
Jupyter Notebook

caenrigen / enhanced_brain_magnet

eBM: Enhanced BRAIN-MAGNET convolutional neural network modeling non-coding regulatory elements enhancer activity in human neural stem cells

genomics pytorch convolutional-neural-network genetic-variants motif-discovery neurogenomics starr-seq enhancer-prediction explainable-ai mpra neurodevelopmental-disorders modisco deeplift ncre pytorch-lightning shapley-additive-explanations apple-silicon variant-prioritization noncoding-genetic-variation

Updated Nov 23, 2025
Jupyter Notebook

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