🔍 Post Assembly Variants Finder
-
Updated
Oct 7, 2022 - Python
#
splice-variants
Here are 6 public repositories matching this topic...
Analysis scripts used for the manuscript Benchmarking deep learning splice prediction tools using functional splice assays
-
Updated
May 4, 2021 - Python
45k context transformer for splice site prediction implemented with PyTorch.
rna-seq pytorch transformer hard-attention splice-junctions transformer-models splice-site splice-variants splice-site-prediction
-
Updated
Jul 24, 2025 - Jupyter Notebook
IsoAligner: dynamic mapping of amino acid positions across protein isoforms
bioinformatics alternative-splicing protein-sequences sequence-to-sequence ucsc sequence-alignment uniprot-ids amino-acid-sequence aminoacid needleman-wunsch-algorithm refseq splice-variants exon-mapping protein-ids aminoacid-position protein-isoform
-
Updated
Jun 14, 2022 - Python
IsoAligner: dynamic mapping of amino acid positions across protein isoforms
rest-api alternative-splicing ensemble webtool ucsc uniprot sequence-alignment protein-sequence refseq splice-variants exon-mapping protein-ids aminoacid-position protein-isoform
-
Updated
May 4, 2022 - Python
This repository provides scripts for RNA-Seq data analysis using JunctionSeq and QoRTs, enabling quality control, differential splicing analysis, and generation of browser tracks.
bioinformatics quality-control rna-seq genomics data-analysis transcriptomics rna-seq-analysis spliced-alignment splice-junctions differential-splicing splice-variants junctionseq qorts
-
Updated
Jun 7, 2023 - R
Improve this page
Add a description, image, and links to the splice-variants topic page so that developers can more easily learn about it.
Add this topic to your repo
To associate your repository with the splice-variants topic, visit your repo's landing page and select "manage topics."