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snv-annotation

Here are 3 public repositories matching this topic...

waqasuddinkhan / MACARON-GenMed-LabEx

Multi-bAse Codon-Associated variant Re-annotatiON (MACARON)

github python vcf gatk variants snp annotator macaron snv annotation-framework snpeff snv-annotation codon snpcluster pcsnv

Updated May 18, 2020
Python

nickveltmaat / SNVcaller

Pipeline to call SNV's with 4 tools (VarDict, LoFreq, Mutect2 & SiNVICT)

somatic-variants somatic-mutations snv ctdna snvs cfdna vardict mutect2 cell-free-dna snv-annotation indel lofreq sinvict

Updated Nov 8, 2022
Python

ghga-de / nf-snvcalling

a Nextflow SNV calling and annotation pipeline based on DKFZ-ODCF/SNVCallingWorkflow

somatic-variants somatic-mutations snv snv-annotation dkfz ghga snv-call odcf

Updated Oct 25, 2024
Python

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