A lightweight platform-accelerated library for biological motif scanning using position weight matrices.
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Nov 18, 2024 - Rust
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sequence-motif
Here are 7 public repositories matching this topic...
7C: Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs
transcription-factors
prediction
hi-c
chip-seq
r-package
sequence-motif
3d-genome
chromatin-interaction
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Dec 16, 2018 - R
Cython bindings and Python interface to the MEME suite, a collection of tools for the analysis of sequence motifs.
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Jun 14, 2024 - Cython
Implementation of three algorithms to solve the motif finding problem.
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May 6, 2021 - Python
DeepLncCTCF for identification and analysis of consensus RNA motifs binding to the genome regulator CTCF
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Aug 14, 2020 - Python
calculates probability of k-mer motif occurrence in n ntd random sequence
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Oct 24, 2018 - Python
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