A lightweight platform-accelerated library for biological motif scanning using position weight matrices.
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Dec 4, 2025 - Rust
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sequence-analysis
Here are 9 public repositories matching this topic...
A small and fast FM-Index for Rust
search rust bioinformatics genomics algorithms data-structures index suffixarray string-search string-algorithms fm-index suffix-array sequence-analysis fmindex
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Jan 3, 2026 - Rust
Faster FASTA and FASTQ file processing command line tool - parsing, sorting, deduplication, transliteration, filter, and stats
hashing parser bioinformatics string-manipulation sorting-algorithms fasta fastq deduplication sequence-alignment sequence-analysis
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Nov 24, 2025 - Rust
fast, reliable and handy demultiplexing tool for fastx files
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Jul 29, 2025 - Rust
k-mer similarity metrics for two fastx files
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Jun 23, 2025 - Rust
A rust crate that automatically cleans up a gene alignment by trimming to ORF and identifying and/or removing problematic sequences.
data-science bioinformatics fasta data-normalization data-cleaning sequence-alignment sequence-analysis sequence-annotation ncird ncird-id data-normalisation cdc-influenza-division
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Jan 3, 2026 - Rust
rust plotters for sequences
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Dec 23, 2025 - Rust
Intelligent biological sequence database reduction with content-addressed storage
rust bioinformatics genomics taxonomy computational-biology data-deduplication bioinformatics-pipeline fasta proteomics blast bitemporal sequence-alignment sequence-analysis delta-encoding content-addressed-storage bioinformatics-tools database-reduction
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Oct 29, 2025 - Rust
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