(formerly eelpond) an automated RNA-Seq workflow system
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Oct 14, 2020 - Python
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rnaseq-analysis
Here are 7 public repositories matching this topic...
Code, documentation, and tutorials for the DGD model trained on bulk RNA-Seq data.
rna-seq neural-network rnaseq rna-seq-analysis deep-generative-model deep-generative-models rnaseq-analysis deep-generative-modelling
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Aug 27, 2024 - Python
Docker Integrated Comparison of Alternative Splicing (AS) Tools. Benchmarking AS tools and genomic alignment tools.
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Jan 5, 2023 - Python
The TRMRNASeqTools is a SHELL and Python based pipeline designed for automatic general analysis for TRM sRNA sequencing data in supported plants.
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Sep 23, 2025 - Python
Simple Snakemake RNA-Seq pipeline
python rna-seq snakemake r pandas python3 bioconductor salmon miniconda dge miniconda3 dge-analysis salmon-deseq2 rnaseq-pipeline snakemake-pipeline rnaseq-analysis snakemake-rna-seq
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Mar 21, 2023 - Python
RNA Sequencing Data Analysis: A 2025 Review and Updated Snakemake Pipeline
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Mar 3, 2025 - Python
Splicing assembly for non-model organisms using RNAseq data
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Apr 28, 2025 - Python
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