micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read The Docs documentation below
Easy and comprehensive assessment of predictive power, with support for neuroimaging features
MATLAB Toolbox for estimating nonfractal connectivity and fractal connectivity
A Matlab-based software package for preprocessing the resting-state fMRI data
Collection of Matlab functions for denoising fMRI data
Code used for research project. Our objective is to identify people based on patterns of brain connectivity (as indexed by MEG) using Deep Learning and other linear methods
Leading Eigenvector Dynamics Analysis Matlab Toolbox
scorEpochs: a computer aided scoring tool for resting-state M/EEG epochs
Frequency analysis for resting-state EEG data.
This toolbox enables to automatically preprocess and analyze resting-state Biosemi EEG files, relying on the EEGLAB software and additional toolboxes.
This repo contains preprocessing scripts used in the lab, organized (mainly) by imaging modality.
Code associated with pre-print titled: In-Scanner Thoughts shape Resting-state Functional Connectivity: how participants “rest” matters.
Final project for the "Python for (open) Neuroscience" course (2024).
Code for "Ultra-slow fluctuations in the fourth ventricle as a marker of drowsiness" Gonzalez-Castillo et al. 2022 Neuroimage
we will use supervised learning techniques to classify the independent component (IC) images of resting state functional magnetic resonance imaging (rs-fMRI) scans as Noise and Resting state network (RSN)
Scripts used in the "Spatiotemporal Structure of Spontaneous Brain Activity in Autistic Children" project.
MATLAB GUI pipeline for preprocessing, plotting, and exporting EEG data. Integrates EEGLAB and Unfold Toolbox for ERP analysis, handling standard and overlapping ERPs, with SPSS-compatible output.
A Quality Control database for the HCP resting-state scans
Volume Local Analysis -- Chest Wall Plethysmography using Opto-Electronic Sensor Data
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