Insertion sequences (Insertion Element) [https://en.wikipedia.org/wiki/Insertion_sequence] collected from ISfinder (https://isfinder.biotoul.fr/)
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Oct 6, 2020
#
prokka
Here are 9 public repositories matching this topic...
Prokka批量执行脚本 Batch Prokka can help you execute prokka batch assemblies.
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Nov 23, 2022 - Go
Plasmidome analysis to track the transfer route of AMR genes in bacteria
fasta-sequences
rgi
antimicrobial-resistance-genes
prokka
plasmidfinder
abricate
virulence-genes
antimicrobial-genes-annotation
amr-detection
refseq-genbank
panaroo
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Oct 15, 2023 - Jupyter Notebook
[a.a. 23/24] M. Gambardella
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Mar 13, 2024
XSLT file to transform a UniProt proteome XML file to a protein fasta file for Prokka
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Jan 18, 2020 - XSLT
🦇🧫📊Supplementary materials for study on bat gut shotgun metagenomics
phylogenetics
beta-diversity
microbial-communities
blast
spades
differential-abundance-analyses
fastq-files
refseq
alpha-diversity
prokka
quast
kraken2
abricate
lab-journal
maaslin2
shotgun-metagenomics
fastani
humann3
virsorter2
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Oct 28, 2024 - HTML
This project is part of the course of Computational Microbial Genomics, held by Nicola Segata (A.Y. 2021-2022) @ University of Trento.
genome-annotation
microbial-genomics
contigs
taxonomic-classification
pangenome
phylogenetic-analysis
roary
prokka
mags
fasttree
itol
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Apr 26, 2022 - TeX
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