R package to generate the same BEAST2 XML parameter files as generated by BEAUti 2
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May 2, 2025 - R
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phylogenetic-inference
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R package to run BEAST2
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May 13, 2025 - R
Phylogenetic Inference and Data Visualization for Sequence-Based Typing Methods
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Jun 14, 2023 - Java
This repository provides a comprehensive tutorial for phylogenetic analysis, covering data collection, sequence alignment, tree construction, and interpretation. It runs on AWS SageMaker using Jupyter notebooks and includes tools like MAFFT, Nextclade, and IQ-TREE.
python bioinformatics gcp computational-biology phylogenetic-trees phylogenetics population-genetics high-throughput-sequencing genome-assembly r-programming radseq ipyrad ddrad-seq iqtree phylogenetic-inference
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Jun 6, 2025 - Jupyter Notebook
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