BioDEX: Large-Scale Biomedical Adverse Drug Event Extraction for Real-World Pharmacovigilance.

A collection of signal detection methods used in the field of pharmacovigilance

Smart Adverse Drug Reaction Assessment Tools.

FAERS Adverse Reaction Events database and OpenFDA API

R interface for FDA Adverse Event Reporting System

This repository contains the code of Mining archive.org’s Twitter stream grab for Pharmacovigilance research gold paper.

For this problem, we proposed the use of bidirectional-LSTM’s(Long Short Term Memory) with 1-D CNN layer to classify patient notes at character level and at word level. The 1-D CNN is employed to scale back the training time. In order to improve the performance, we will also feed the network combined word embedding consisting of Pre-trained word…

An R package for simulating spontaneous reports

Code and Datasets for the paper "Towards early detection of adverse drug reactions: combining pre-clinical drug structures and post-market safety reports", published on BMC Medical Informatics and Decision Making in 2019.

An R package containing functions for quantifying drug exposure using routinely collected prescribing databases

https://github.com/zietzm/phenotype_standardization/wiki

The PVClinical project aims to build a web-based platform, built to support Active Pharmacovigilance processes via the integration of several heterogeneous data sources.

a database for pediatric drug safety signals

Automated browser to download drug adverse reaction reports from the European Database of Suspected Adverse Reactions Reports (EudraVigilance)

Functions to extract drug records from the FAERS (FDA Adverse Event Reporting System) database

Structured lists (csv, xml, sql) for PV apps configuration & localization.

Regional ADR event detection using Deep Learning

Rank aggregated signal detection for VAERS data

Drug Side Effect Checker - The Pharmacovigilance Dashboard Prototype build with FDA (FAERS) data