Atomsk: A Tool For Manipulating And Converting Atomic Data Files -

OVITO Python modifier to compute the Warren-Cowley parameters.

OVITO Python modifier to generate bulk crystal structures with target Warren-Cowley parameters.

lindemann is a python package to calculate the Lindemann index of a lammps trajectory

A series of recipes and tutorials on how to use python scripting with OVITO

Windows application to simulate the Galton board, allows you to configure different parameters of the problem.

This OVITO Python modifier generates a histogram of the Voronoi motifs sorted by occurence.

OVITO Python modifier to chang the particle type values to create a random solid solution of a given composition.

Code, graphs, and input files utilized within graphene energy minimization research being conducted in an internship under NJIT's Prof. Dibakar Datta

Template for a custom Python modifier which hooks into OVITO

OVITO Python modifier to find shortest rings formed by bonds in a system

OVITO → Blender Visualizer: scripts to play OVITO/LAMMPS dumps in Blender (viewport realtime), PC2 bake + Geometry Nodes instancing, scalable particle shapes, stable renders.

A file reader & writer for OVITO surface meshes with their auxilliary information

Produces neutralized nanoparticles (made up of Fe2O3 unit cells from the standard Fe2O3 .cif file) in .lmp format. Uses the Ovito python library to accomplish this.

OVITO Python modifier to calculate the angles between all pairwise combinations of bonds at one particle.

Match parts of molecules using query strings

This is a wrapper for OVITO around the "Score-based denoising for atomic structure identification" presented in this graphite repo. Further information and the official citation on arXiv.

Render LaTeX text in the viewport

Apply reduction operations to OVITO properties

Align molecules using Kabsch algorithm