Reproducing IA^3 2020 Paper: "Parallelizing Irregular Computations for Molecular Docking"
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Updated
Jan 7, 2022 - Shell
Reproducing IA^3 2020 Paper: "Parallelizing Irregular Computations for Molecular Docking"
Collection of ArchLinux-based OpenCL-enabled containers
VC4CLStdLib for archlinux building
You can run passively cooled single slot Tesla GPU/KI cards in a HP Proliant with a modified iLO ROM that take care of the fan and consequently temperature control.
Compiler for the VC4CL OpenCL implementation packaged for archlinux.
Enablement for Caffe (OpenCL) on AMD GPUs
Automatic download OpenCL header files (version 1.0 to 2.1) from Khronos Group repositories
Reproducing paper: "Benchmarking the Performance of Irregular Computations in AutoDock-GPU Molecular Docking"
The script packages the OpenCL part from AMDGPU-PRO into a single .deb package to enable OpenCL on Debian, Ubuntu and Mint.
Docker build scripts for TornadoVM on GPUs: https://github.com/beehive-lab/TornadoVM
Spector: An OpenCL FPGA Benchmark Suite
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