StarDist - Object Detection with Star-convex Shapes
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May 30, 2025 - Python
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nuclei-segmentation
Here are 19 public repositories matching this topic...
Encoder-Decoder Cell and Nuclei segmentation models
ai ml pytorch microscopy cell-segmentation digital-pathology panoptic-segmentation nuclei-segmentation tissue-segmentation cellpose timm stardist hovernet omnipose
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May 7, 2025 - Python
[IMAVIS] Official implementation of "ASF-YOLO: A Novel YOLO Model with Attentional Scale Sequence Fusion for Cell Instance Segmentation".
deep-neural-networks yolo medical-image-computing medical-image-processing cell-segmentation nucleus-detection computer-vision-algorithms instance-segmentation deep-learning-framework cell-detection medical-image-analysis data-science-bowl-2018 medical-image-segmentation nuclei-segmentation lesion-segmentation hematoxylin-eosin-staining breast-cancer-segmentation detection-segmentation-algorithm histopathology-image-analysis breast-cancer-cell
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Jun 1, 2025 - Python
StarDist plugin for napari
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Aug 24, 2024 - Python
Segment Anything for Histopathology
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Jun 16, 2025 - Python
MICCAI2023 - TransNuSeg: A Lightweight Multi-Task Transformer for Nuclei Segmentation
medical-image-segmentation nuclei-segmentation swin-transformer miccai2023 shared-attention-heads lightweight-multi-task-framework
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Feb 5, 2024 - Python
Feature extraction from GEOJson nuclei and tissue segmentation maps
graph-algorithms feature-extraction spatial-data-analysis morphological-analysis digital-pathology clustering-methods roi-selection nuclei-segmentation regionalization tissue-segmentation immune-infiltration whole-slide-image whole-slide-annotation
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Jun 23, 2025 - Python
NuHTC: A Hybrid Task Cascade for Nuclei Instance Segmentation and Classification
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Jul 8, 2025 - Python
H&E ROI-Level and WSI-Level Nuclei Segmentation with HoVer-Net
deep-learning whole-slide-imaging computational-pathology biomedical-image-analysis pathology-image nuclei-segmentation pathomics hover-net he-staining
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Jul 30, 2024 - Python
Toolbox for histopathology image analysis
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Jul 10, 2025 - Python
Implementation of U_Net architecture for medical image segmentation purpose.
medical-imaging unet segementation unet-image-segmentation unet-keras unet-tensorflow nuclei-segmentation
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Jun 13, 2020 - Python
MICCAI-COMPAY-2021: An automatic nuclei image segmentation based on multi-scale split-attention u-net
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Sep 12, 2022 - Python
CompSegNet: An enhanced U-shaped architecture for nuclei segmentation in H&E histopathology images
deep-learning transformers convolutional-neural-networks computational-pathology gcnet nuclei-segmentation receptive-fields global-context-modeling moblilenetv2 residual-bottleneck-transformer
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Aug 12, 2024 - Python
compact version of the official hovernet impl in pytorch
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May 21, 2023 - Python
A Napari plugin for automated cell nuclei detection, cell proliferation & population growth analysis, and single-cell tracking in brightfield and fluorescence microscopy images
yolo nuclei cell-segmentation cell-detection cell-tracking nuclei-detection nuclei-segmentation timelapse-image microscopy-image-analysis cell-proliferation-assays
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Jun 7, 2025 - Python
pytorch implement of AD-GAN
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Jan 22, 2023 - Python
NuSegDG: Integration of Heterogeneous Space and Gaussian Kernel for Domain-Generalized Nuclei Segmentation
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Jun 26, 2025 - Python
Nucleia image segmentation with U-net...
deep-neural-networks deep-learning tensorflow image-processing convolutional-neural-networks image-segmentation-tensorflow nuclei-segmentation u-net-keras
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May 21, 2025 - Python
Selected Topics in Visual Recognition using Deep Learning, NYCU. CodaLab competition - Instance Segmentation
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Dec 17, 2021 - Python
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