aramis-lab / clinica Star 262 Code Issues Pull requests Discussions Software platform for clinical neuroimaging studies python machine-learning scikit-learn neuroscience neuroimaging spm fsl ants freesurfer bids-format mrtrix3 brainweb Updated Sep 19, 2025 Python
ruizengalways / FOD-Net Star 26 Code Issues Pull requests FOD-Net: A Deep Learning Method for Fiber Orientation Distribution Angular Super Resolution deep-learning medical-imaging connectomics diffusion-mri tractography fod mrtrix3 Updated Apr 26, 2022 Python
lamyj / erwin Star 12 Code Issues Pull requests Quantitative MRI toolbox in Python mri segmentation quantitative nifti motion-correction fsl diffusion-mri ants cbf relaxometry quantitative-susceptibility-mapping mrtrix3 field-mapping magnetization-transfer Updated Dec 19, 2024 Python
rmukh / basicregistrationMRIpipeline Star 1 Code Issues Pull requests The basic structural and diffusion MRI registration with pre-processing pipeline in Python. image-processing mri image-registration fsl diffusion-mri nipype ants mrtrix3 pybids Updated Oct 10, 2025 Python