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Apr 22, 2017 - Python
motif-discovery
Here are 75 public repositories matching this topic...
Structural Temporal Modeling to characterize temporal networks
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Dec 4, 2023 - Jupyter Notebook
GIMSAN: motif-finder with biologically realistic and reliable statistical significance analysis
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Jan 11, 2016 - C
Details application of UniDip to the problem of biologic motif discovery. We find that UniDip is able to preprocess DNA sequences such that MEME is able to find motifs 70% faster.
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Jun 9, 2018 - HTML
Evaluate de novo motif finding tools
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Jun 14, 2021 - Python
The repository stores files that were used to perform Tbx5 transcription factor analysis with house mouse heart cells.
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Jun 22, 2022 - TeX
XXmotif: eXhaustive, weight matriX-based motif discovery in nucleotide sequences
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Apr 21, 2017 - Perl
HSEARCH: fast and accurate protein sequence motif search and clustering
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Mar 23, 2017 - C++
Classify time series data using motifs discovered from Sequitur processing of SAX discretized data.
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Apr 20, 2017 - Python
Scalable mining of multidimensional time series motifs.
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Aug 9, 2024 - Jupyter Notebook
Docker image to easy run meme suite in web mode http://meme-suite.org/
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Oct 26, 2020 - Dockerfile
C++ Codes for the DNA Sequence Motif Discovery Using Greedy Construction Algorithm Based Techniques
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Dec 22, 2021 - C++
Finding Network Motifs Using MCMC Sampling
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Aug 4, 2020 - C++
The matrix profile data structure and associated algorithms for mining time series data
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Mar 23, 2022 - F#
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Jun 23, 2022 - PostScript
A tool to search for motifs within the whole genome or regions of interest
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Feb 10, 2019 - Python
Scripts for motif assessment for HOCOMOCO v10/v11.
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Oct 18, 2020 - Ruby
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May 4, 2018 - Python
MapReduce-based Algorithm for Motif Search
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May 19, 2023 - Java
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