🍪 SEnsible Step-wise Analysis of DNA MEthylation BeadChips
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Nov 23, 2025 - R
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microarray
Here are 42 public repositories matching this topic...
R package for normalizing RNA-seq data to make them comparable to microarray data.
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May 4, 2023 - R
🔬 R package: Analysis of Large Affymetrix Microarray Data Sets
package r analysis hpc notebook dna expression microarray rna reproducibility large-scale affymetrix copy-number
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Dec 14, 2025 - R
R package for visualization of omics data
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Oct 11, 2024 - R
Deconer: A Comprehensive and Systematic Cell Type Deconvolution Evaluator
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Sep 27, 2024 - R
Temporal Integrative Genomics Analysis in R
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Sep 27, 2025 - R
scrape REVIGO Gene Ontology web app and plot results
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Mar 17, 2021 - R
Bayesian Gene Selection Criterion (BGSC) approach
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Nov 8, 2019 - R
R script used for the preparation of the initial input file, i.e. merging of various studies by logFC (LogFC),
meta rna-seq merge microarray ranker l distance-calculation ranking-algorithm metaanalysis rrho rankergui
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Jul 28, 2025 - R
Simple to use package for OMICS data analysis (featuring limma, WGCNA, GSEA)
rnaseq microarray proteomics network-analysis geneset-enrichment mirna unsupervised-machine-learning
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Dec 7, 2025 - R
Affymetrix OncoScan / OncoScan_CNV processing using apt-copynumber-onco-ssa (2.4.0)
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Dec 6, 2018 - R
Nextflow pipeline for microarray and RNA-seq
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Dec 5, 2025 - R
This R script is used to analyze microarray data acquired by an Agilent SureScan Microarray Scanner.
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Jan 13, 2023 - R
WGCNA-based lncRNA module analysis in castration-resistant prostate cancer metastasis (GSE74685).
bioinformatics bioinformatics-pipeline microarray bioinformatics-analysis lncrna wgcna prostate-cancer-detection lncrna-pipeline microarray-data-analysis prostate-cancer-biopsies gse74685
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Dec 5, 2025 - R
Utilities for processing and analyzing HIPC gene expression data in ImmuneSpace
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Dec 14, 2022 - R
Affymetrix CytoScan (750k / HD) processing using apt-copynumber-cyto-ssa (2.4.0)
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Jul 8, 2024 - R
R scripts for RF and RBF-SVM for Acute Myeloid Leukemia subtypes multiclass classification using gene expression profiles. LASSO feature selection, SMOTE sampling, 10-fold cross-validation, variable importance plot, PCA plot, normalized Confusion Matrix, GSE13159.
machine-learning data-mining bioinformatics random-forest rbf-kernel gene-expression pca-analysis supervised-learning classification microarray support-vector-machines biomarkers variable-importance-plots confusion-matrix-heatmap aml-subtypes
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Oct 14, 2025 - R
R package implementations and interfaces to In silico research group's bioinformatics toolbox inbix
bioinformatics rna-seq r analysis genetics bioinformatics-pipeline microarray bioinformatics-analysis bioinformatics-scripts rpackage
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Nov 29, 2018 - R
Analysis of gene expression in umbilical cord blood from ASD, Non-TD, and TD subjects in the MARBLES and EARLI studies
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Jan 12, 2022 - R
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