MAAPster is a comprehensive tool to perform transcriptome analysis of human or mouse Affymetrix gene expression data
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Updated
Jan 23, 2024 - R
MAAPster is a comprehensive tool to perform transcriptome analysis of human or mouse Affymetrix gene expression data
Scripts using GEOquery package to fetch expression matrices and phenotypic data associated with GSE datasets
NormalizeQuantiles.jl implements quantile normalization
A list of publicly available Microarray Gene Expression datasets with proper attribution and associated toolkits.
Bioinformatics course project - Fall 2020, analysis of genetic expression omnibus (GEO) data series of Acute Myeloid Leukemia
An R tool to detect and correct batch-effects in gene-expression data (Microarray and bulk-RNAseq))
Selection of genes to be cultured and studied on-board for the AcubeSAT nanosatellite project. Microarray data analysis in R. Meta-analysis in R. Literature review and more
Source code and description of GCSscore Package
Collection of gene expression datasets
Selection of genes to be cultured and studied on-board for the AcubeSAT nanosatellite project. Microarray data analysis in R. Meta-analysis in R. Literature review and more
plant microarrya analysis from expression datasets
Acute Myeloid Leukemia Microarray Analysis
Data analysis and integration of several transcriptomics studies to uncover genes and co-expression networks associated with the ageing process.
The Trypanosoma cruzi Antigen and Epitope Atlas: deep characterization of individual antibody specificities in human Chagas Disease patients across the Americas
Visualization of co-expression networks
"Identification of Biomarkers for Early-Stage Hepatocellular Carcinoma (HCC)" aims to address the critical global challenge of late-stage cancer diagnosis, which significantly lowers patient survival rates. It explores microarray gene expression datasets from GEO to identify potential early-stage biomarkers for improved patient outcomes.
Nextcast: a software suite to analyse and model toxicogenomics data
Microarray Data Analysis | Bioinformatics Course Project, Fall 2022
GEO microarray data analysis
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