MERlin is an extensible analysis pipeline applied to decoding MERFISH data
-
Updated
Sep 21, 2021 - Python
#
merfish
Here are 4 public repositories matching this topic...
GPU accelerated post-processing for 2D or 3D iterative barcoded FISH data.
-
Updated
Sep 12, 2025 - Python
First step of data wrangling in MERFISH data project
-
Updated
Jun 12, 2024 - Python
A snakemake pipeline to perform cell segmentation on MERFISH spatial transcriptomics data.
cell-segmentation watershed-algorithm single-cell-rna-seq spatial-transcriptomics merfish cellpose vizgen vizgen-postprocessing
-
Updated
Nov 22, 2023 - Python
Improve this page
Add a description, image, and links to the merfish topic page so that developers can more easily learn about it.
Add this topic to your repo
To associate your repository with the merfish topic, visit your repo's landing page and select "manage topics."