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Part of Python for Scientific Computing Special Topic Trinity 2021, MSc Mathematical Modelling and Scientific Computing, University of Oxford. Experimental modification of Thomas Aynaud's package python-louvain to include spatial effects.
AltAnalyze is a multi-functional and easy-to-use software package for automated single-cell and bulk gene and splicing analyses. Easy-to-use precompiled graphical user-interface versions available from our website.