Simple scripts to parallelize miRNA analysis with sRNAtoolbox performed for my Master thesis.
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Updated
Aug 20, 2019 - Shell
Simple scripts to parallelize miRNA analysis with sRNAtoolbox performed for my Master thesis.
Plasma cell-free DNA hydroxymethylomes discriminate disease state in EGFR-mutant non-small cell lung cancer.
Identification of gene-fusions, including EML4-ALK
Code for SCLC cfMeDIP-seq PRIME as described in the following paper: doi: 10.1016/j.isci.2022.105487
This repository contains the code used in the following publication: doi.org/10.1016/j.isci.2022.105487
cfDNAPro specializes in standardized and robust cfDNA fragmentomic analysis
Structural Variation and fusion detection using targeted sequencing data from circulating cell free DNA
Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.
R package to work with ctDNA sequencing data
A simplified pipeline for ctDNA sequencing data analysis
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