A Matlab library of numerical methods for solving differential equations stochastically and continuously .
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Nov 12, 2017 - MATLAB
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gillespie-algorithm
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This repository contains codes developed in 2022 to simulate the bacterial biofilm formation with the proposed stochastic biofilm disruption model based on quorum sensing mimickers and chemical reactions.
chemical-reaction-networks gillespie-algorithm quorum-sensing biofilm-growth quorum-sensing-mimickers biofilm-disruption
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Sep 20, 2024 - MATLAB
Bottom-up dynamical modeling of biological systems using ordinary, partial, and stochastic differential equations.
matlab biological-simulations dynamical-systems cell-cycle dynamical-modeling oscillations gillespie-algorithm matlab-scripts biological-systems biophysical-modeling
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May 16, 2024 - MATLAB
Code to simulate a stochastic system using the Gillespie algorithm with comparisons to the mean field model and steady state analysis.
matlab odes gillespie-algorithm stochastic-simulation steady-state-analysis mean-field-approximation
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Jul 9, 2023 - MATLAB
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