pymCADRE enables the reconstruction of tissue-specific metabolic models in Python using transcriptomic data and information of the network topology.

epigenome scale metabolic modeling for cancer metabolism

Constraint-based metabolic modeling software from the Chandrasekaran Lab

Genome scale metabolic model for Ogataea polymorpha NCYC495.

Supplementary Material for Blasche et al

MSc Thesis Code

Integrating the transcriptional regulatory network with genome-scale metabolic models.