Tool to analyze bacterial fluorescence in time-lapse microscopy

LLM-assisted orchestration and evaluation workflow for genetic circuit design using Cello-based CAD pipelines.

Proyecto de sistemas dinamicos basado en el circuito genetico Repressilator.

Code for article "A Linear Mixed Effects Model for Evaluating Synthetic Gene Circuits"

GenCircuitLab — Interactive Synthetic Biology & Genetic Circuit Design Laboratory. 6 modules: toggle switch, repressilator, CRISPR logic gates, GRN builder, Gillespie SSA, metabolic flux analysis. Zero dependencies.

A playable genetic circuit simulation game where players test logic-based inputs (IPTG, AHL, aTc) and navigate synthetic feedback loops. Built with Tellurium, Streamlit, and a custom FSM engine. Includes two working levels and real-time biological modeling.

Another Genetic Circuit Transcriber

Repositorio de código del TFG de Física. Modelo del reloj de segmentación de la somitogénesis.

A synthetic biology logic circuit that combines memory, logic gating, and reset to simulate FSM-like behavior using AraC, IPTG, AHL, and GFP.

My submissions for the Advanced Special Topics I course that I took at UNBC in 2021.