MyGene.info: A BioThings API for gene annotations
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Updated
Nov 1, 2024 - Python
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gene-annotations
Here are 6 public repositories matching this topic...
Retrieve PubMed articles, text-mining annotations, or molecular data from >35 Entrez databases via easy to use Python package - built on top of Entrez E-utilities API.
pubmed
pubmed-central
entrez
meta-analysis
gene-annotations
literature-mining
eutilities
literature-search
entrez-eutilities
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Nov 2, 2023 - Python
A fully automated gene annotator from RNA-Seq expression data
bioinformatics
rna-seq
finder
bioinformatics-pipeline
genome-annotation
protein-sequences
gtf
gene-models
transcripts
gene-annotations
changepoint-detection
predict-genes
gene-annotation-pipeline
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Updated
Jul 1, 2023 - Python
Rails application for storing and parsing clinical exome VCF files. Gene annotations can be retrieved via Biomart integration from Ensembl dataset. Originally developed as part of a Masters in Bioinformatics project @ University of Exeter
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May 7, 2017 - Ruby
Gene Info Extractor: A Python script to extract gene information and annotations from CSV data
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Jun 9, 2023 - Python
A Python script to filter and extract information from GTF files based on chromosome names, designed to be easily accessible for biologists without extensive programming experience.
bioinformatics
genomics
gtfs
computational-biology
data-extraction
gtf
gtfs-dataset
data-filtering
biologists
gene-annotations
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Updated
Jun 7, 2023 - Python
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