SIMPLI is a highly configurable pipeline for the analysis of multiplexed imaging data.
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Updated
Jul 11, 2023 - R
SIMPLI is a highly configurable pipeline for the analysis of multiplexed imaging data.
Rewrite the LOUPE library (https://github.com/antoine77340/LOUPE) into Keras version. Many learnable pooling or differentiable aggregation methods are covered. (NetVLAD, NetRVLAD, SoftDBoW, NetFV, CG)
Official implementation of GateNet
Bundle of Useful scRNA-seq Gating Tools Extending seuRat
Gated-ViGAT. Code and data for our paper: N. Gkalelis, D. Daskalakis, V. Mezaris, "Gated-ViGAT: Efficient bottom-up event recognition and explanation using a new frame selection policy and gating mechanism", IEEE International Symposium on Multimedia (ISM), Naples, Italy, Dec. 2022.
Model from Tsuda B, Tye KM, Siegelmann HT, Sejnowski TJ. A modeling framework for adaptive lifelong learning with transfer and savings through gating in the prefrontal cortex. Proceedings of the National Academy of Sciences, 117 (47), 29872-29882, 2020. https://doi.org/10.1073/pnas.2009591117
Mixture of Experts from scratch
Superfluid stream gating authorization tool
A small JavaScript library based on state machines (but not entirely) for isolating and managing its own UI-state (transient / non-persisted) layer while controlling a Domain-state (non-transient / persisted) layer like Redux, Radixx
Flow/Mass Cytometry Gating via Spatial Kernel Density Estimation
Yet another Verilog static analyzer
GASP: Gated Attention for Saliency Prediction (IJCAI-21)
Part I : 3D Object Detection with Waymo Dataset and Complex YOLO; Part II: Sensor Fusion(camera and lidar) using EKF and tracking
Gate content and membership on Netlify without a paid plan. Also an example of a netlify contact form with user registration requirement built in.
Contains MATLAB scripts used by members of the Glass Lab at UC Berkeley to analyze flow cytometry data.
Code for GUI visualization of data, for import of GuavaMuse .FCS files, for flow cytometry style gating, and for calculating enrichment and depletion after a given procedure.
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